RSKR_0000269500 (Rhabditophanes kr3021)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 RSKR_0000269500 T336858_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000269500.1 Sox 29 93

Links

Other Sox family TFs
Other Rhabditophanes kr3021 TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.603
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.603
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.603
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.603
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.594
PPA06513 Pristionchus pacificus PPA06513 N 0.594
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.587
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.571
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.539
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.537
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.537
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.537
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.537
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.537
ANCCAN_04253 Ancylostoma caninum ANCCAN_04253 N 0.532
L892_g23618 Steinernema scapterisci L892_g23618 N 0.530
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.528
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.510
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.510
ASU_05994 Ascaris suum ASU_05994 N 0.510
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.508
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.506
PPA02261 Pristionchus pacificus PPA02261 N 0.506
L889_g16198 Steinernema feltiae L889_g16198 N 0.503
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.503
L893_g23503 Steinernema glaseri L893_g23503 N 0.503
L898_g7743 Steinernema monticolum L898_g7743 N 0.503
L889_g29516 Steinernema feltiae L889_g29516 N 0.502
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I 0.499
L892_g19058 Steinernema scapterisci L892_g19058 N 0.497
L893_g29974 Steinernema glaseri L893_g29974 N 0.497
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.497
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.497
L898_g4830 Steinernema monticolum L898_g4830 N 0.497
L889_g9094 Steinernema feltiae L889_g9094 N 0.495
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.495
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.495
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.495
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.493
CJA04355 Caenorhabditis japonica CJA04355 N 0.493
CRE11852 Caenorhabditis remanei CRE11852 N 0.487
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.485
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.484
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.484
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.484
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.484
LOAG_08062 Loa loa LOAG_08062 N 0.484
Bm8632 Brugia malayi Bm8632 N 0.484
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.484
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.476
ASU_09087 Ascaris suum ASU_09087 N 0.476
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.476
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.474
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.474
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N 0.474
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.474
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.474
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.474
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.474
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.474
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.474
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.474
NECAME_17981 Necator americanus NECAME_17981 N 0.474
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.474
NECAME_17555 Necator americanus NECAME_17555 N 0.474
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.472
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.469
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.469
NECAME_16525 Necator americanus NECAME_16525 N 0.469
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.469
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.469
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.469
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.469
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.467
Minc03634 Meloidogyne incognita Minc03634 N 0.467
Minc04648 Meloidogyne incognita Minc04648 N 0.467
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.467
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.467
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.467
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.467
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.465
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.464
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N 0.461
L596_g8199 Steinernema carpocapsae L596_g8199 N 0.458
L892_g2503 Steinernema scapterisci L892_g2503 N 0.458
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N 0.454
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N 0.452
ASU_05752 Ascaris suum ASU_05752 N 0.452
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N 0.449
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N 0.449
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N 0.449
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N 0.449
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N 0.449
HCOI00417600 Haemonchus contortus HCOI00417600 N 0.449
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N 0.449
NECAME_10840 Necator americanus NECAME_10840 N 0.449
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N 0.449
1400010135 Ostreococcus tauri 1400010135 I 0.446
CBN25379 Caenorhabditis brenneri CBN25379 I 0.444
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.444
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.444
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.439
ASU_07820 Ascaris suum ASU_07820 N 0.439
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N 0.438
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N 0.438
Bcin01g08840 Botrytis cinerea Bcin01g08840 I 0.437
PHUM125270 Pediculus humanus PHUM125270 N 0.435
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.432
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.428
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.428
ASIM_0000156001 Anisakis simplex ASIM_0000156001 N 0.427
gw1.20.66.1 Ostreococcus RCC809 gw1.20.66.1 N 0.425
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.424
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N 0.416
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.416
Ocbimv22006454m.g Octopus bimaculoides Ocbimv22006454m.g N 0.415
Phatr3_J45662 Phaeodactylum tricornutum Phatr3_J45662 I 0.415