CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf04887-augustus-gene-0.6
(
Meloidogyne floridensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
maker-nMf.1.1.scaf04887-augustus-gene-0.6
T336594_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf04887-augustus-gene-0.6-mRNA-1
Sox
14
80
PKRAQSAYFIWMQENRERIKKPGMSVADVAKAAGVEWGKLSASEKSVWEKKAADDKKRYEADMEVYR
Links
Other
Sox
family TFs
Other
Meloidogyne floridensis
TFs
279 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc03634
Meloidogyne incognita
Minc03634
N
0.741
Minc04648
Meloidogyne incognita
Minc04648
N
0.741
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.741
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.614
hmg-4
Caenorhabditis elegans
WBGene00001974
N
0.608
CBG09136
Caenorhabditis briggsae
CBG09136
N
0.601
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.592
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.588
NECAME_16525
Necator americanus
NECAME_16525
N
0.588
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.583
HCOI01420700
Haemonchus contortus
HCOI01420700
N
0.583
HCOI02106600
Haemonchus contortus
HCOI02106600
N
0.583
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.580
Bm8632
Brugia malayi
Bm8632
N
0.565
LOAG_08062
Loa loa
LOAG_08062
N
0.565
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.565
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.565
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.565
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.565
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.565
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.560
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.560
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.560
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.560
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.560
L889_g29516
Steinernema feltiae
L889_g29516
N
0.560
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.559
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.559
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.559
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.558
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.558
L893_g23503
Steinernema glaseri
L893_g23503
N
0.558
PPA06513
Pristionchus pacificus
PPA06513
N
0.556
scaffold98-EXSNAP2012.51
Pristionchus exspectatus
scaffold98-EXSNAP2012.51
N
0.556
CJA19030
Caenorhabditis japonica
CJA19030
N
0.554
L889_g16198
Steinernema feltiae
L889_g16198
N
0.554
L898_g7743
Steinernema monticolum
L898_g7743
N
0.552
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.549
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.549
RSKR_0000746900
Rhabditophanes kr3021
RSKR_0000746900
N
0.546
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.541
RSKR_0000128800
Rhabditophanes kr3021
RSKR_0000128800
N
0.540
CRE11852
Caenorhabditis remanei
CRE11852
N
0.539
RSKR_0000269200
Rhabditophanes kr3021
RSKR_0000269200
N
0.536
CJA04355
Caenorhabditis japonica
CJA04355
N
0.533
ANCCAN_08230
Ancylostoma caninum
ANCCAN_08230
I
0.532
ASIM_0001178701
Anisakis simplex
ASIM_0001178701
N
0.530
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
0.530
WBGene00244511
Onchocerca volvulus
WBGene00244511
N
0.529
GPUH_0001272801
Gongylonema pulchrum
GPUH_0001272801
N
0.529
GPUH_0001539601
Gongylonema pulchrum
GPUH_0001539601
N
0.529
nOo.2.0.1.g02324
Onchocerca ochengi
nOo.2.0.1.g02324
N
0.529
ASU_05994
Ascaris suum
ASU_05994
N
0.528
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.528
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.526
nDi.2.2.2.g07477
Dirofilaria immitis
nDi.2.2.2.g07477
N
0.523
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.521
L889_g9094
Steinernema feltiae
L889_g9094
N
0.521
TCNE_0000332201
Toxocara canis
TCNE_0000332201
N
0.521
EVEC_0000079801
Enterobius vermicularis
EVEC_0000079801
N
0.520
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.519
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.519
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.519
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.519
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.519
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.519
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.519
PTRK_0001161700
Parastrongyloides trichosuri
PTRK_0001161700
N
0.519
SPAL_0001085700
Strongyloides papillosus
SPAL_0001085700
N
0.519
SSTP_0000585600
Strongyloides stercoralis
SSTP_0000585600
N
0.519
SVE_0954900
Strongyloides venezuelensis
SVE_0954900
N
0.519
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.519
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.518
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.518
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.518
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.518
L893_g29974
Steinernema glaseri
L893_g29974
N
0.518
L898_g4830
Steinernema monticolum
L898_g4830
N
0.518
WUBG_03677
Wuchereria bancrofti
WUBG_03677
N
0.517
Bm2524
Brugia malayi
Bm2524
N
0.517
LOAG_04347
Loa loa
LOAG_04347
N
0.517
EEL_0000829801
Elaeophora elaphi
EEL_0000829801
N
0.517
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.517
nAv.1.0.1.g03971
Acanthocheilonema viteae
nAv.1.0.1.g03971
N
0.517
nLs.2.1.2.g07238
Litomosoides sigmodontis
nLs.2.1.2.g07238
N
0.517
OFLC_0000770701
Onchocerca flexuosa
OFLC_0000770701
N
0.517
ANCDUO_26276
Ancylostoma duodenale
ANCDUO_26276
N
0.516
ALUE_0000365901
Ascaris lumbricoides
ALUE_0000365901
N
0.515
ASU_09087
Ascaris suum
ASU_09087
N
0.515
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.513
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.513
NECAME_17555
Necator americanus
NECAME_17555
N
0.513
NECAME_17981
Necator americanus
NECAME_17981
N
0.513
SSTP_0000790100
Strongyloides stercoralis
SSTP_0000790100
N
0.511
SPAL_0001421900
Strongyloides papillosus
SPAL_0001421900
N
0.510
SVE_0536900
Strongyloides venezuelensis
SVE_0536900
N
0.510
CRE03995
Caenorhabditis remanei
CRE03995
N
0.509
HNAJ_0000793101
Hymenolepis nana
HNAJ_0000793101
I
0.506
RSKR_0000587700
Rhabditophanes kr3021
RSKR_0000587700
N
0.505
Ppa-hmg-1.1
Pristionchus pacificus
PPA22767
N
0.502
scaffold113-EXSNAP2012.49
Pristionchus exspectatus
scaffold113-EXSNAP2012.49
N
0.502
scaffold1425-EXSNAP2012.3
Pristionchus exspectatus
scaffold1425-EXSNAP2012.3
N
0.502
CapteG172235
Capitella teleta
CapteG172235
I
0.499
nDi.2.2.2.g04713
Dirofilaria immitis
nDi.2.2.2.g04713
N
0.499
nLs.2.1.2.g02941
Litomosoides sigmodontis
nLs.2.1.2.g02941
N
0.499
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.497
ACAC_0000798501
Angiostrongylus cantonensis
ACAC_0000798501
N
0.496
ACOC_0001190001
Angiostrongylus costaricensis
ACOC_0001190001
N
0.496
ACAC_0000857301
Angiostrongylus cantonensis
ACAC_0000857301
N
0.495
ACOC_0000653601
Angiostrongylus costaricensis
ACOC_0000653601
N
0.495
ECANG7_00770
Echinococcus canadensis
ECANG7_00770
N
0.493
EmuJ_000894800
Echinococcus multilocularis
EmuJ_000894800
N
0.493
LOAG_14354
Loa loa
LOAG_14354
N
0.492
PTRK_0000111400
Parastrongyloides trichosuri
PTRK_0000111400
N
0.492
PPA02261
Pristionchus pacificus
PPA02261
N
0.491
scaffold164-EXSNAP2012.19
Pristionchus exspectatus
scaffold164-EXSNAP2012.19
N
0.491
Bm6643
Brugia malayi
Bm6643
N
0.490
KGM_13852
Danaus plexippus
KGM_13852
I
0.489
MCINX001064
Melitaea cinxia
MCINX001064
I
0.489
nAv.1.0.1.g09805
Acanthocheilonema viteae
nAv.1.0.1.g09805
N
0.486
ANCCAN_21637
Ancylostoma caninum
ANCCAN_21637
N
0.484
ANCCEY_10464
Ancylostoma ceylanicum
ANCCEY_10464
N
0.484
ANCDUO_11855
Ancylostoma duodenale
ANCDUO_11855
N
0.484
DICVIV_01337
Dictyocaulus viviparus
DICVIV_01337
N
0.484
HCOI00417600
Haemonchus contortus
HCOI00417600
N
0.484
HPBE_0002310801
Heligmosomoides bakeri
HPBE_0002310801
N
0.484
HPLM_0000803901
Haemonchus placei
HPLM_0000803901
N
0.484
NBR_0001132501
Nippostrongylus brasiliensis
NBR_0001132501
N
0.484
NECAME_10840
Necator americanus
NECAME_10840
N
0.484
SVUK_0001398701
Strongylus vulgaris
SVUK_0001398701
N
0.484
TELCIR_05217
Teladorsagia circumcincta
TELCIR_05217
N
0.484
TELCIR_22690
Teladorsagia circumcincta
TELCIR_22690
N
0.484
A1O9_00742
Exophiala aquamarina
A1O9_00742
I
0.483
BGIBMGA005289
Bombyx mori
BGIBMGA005289
I
0.483
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.482
TCLT_0000097001
Thelazia callipaeda
TCLT_0000097001
N
0.482
SMUV_0000499601
Syphacia muris
SMUV_0000499601
N
0.480
OSTLU_18991
Ostreococcus lucimarinus
OSTLU_18991
N
0.479
ALUE_0000605501
Ascaris lumbricoides
ALUE_0000605501
N
0.477
ASU_07820
Ascaris suum
ASU_07820
N
0.477
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.476
TsM_000111500
Taenia solium
TsM_000111500
N
0.476
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.475
HmgZ
Drosophila yakuba
FBgn0068145
I
0.475
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.475
GF11622
Drosophila ananassae
FBgn0088662
I
0.475
GG20749
Drosophila erecta
FBgn0112936
I
0.475
GH20784
Drosophila grimshawi
FBgn0128247
I
0.475
GI20867
Drosophila mojavensis
FBgn0143601
I
0.475
GL17523
Drosophila persimilis
FBgn0155126
I
0.475
GM15692
Drosophila sechellia
FBgn0170608
I
0.475
GD25171
Drosophila simulans
FBgn0196483
I
0.475
GJ20604
Drosophila virilis
FBgn0207743
I
0.475
GK15658
Drosophila willistoni
FBgn0217663
I
0.475
ANCCAN_04253
Ancylostoma caninum
ANCCAN_04253
N
0.470
L596_g8199
Steinernema carpocapsae
L596_g8199
N
0.470
L892_g2503
Steinernema scapterisci
L892_g2503
N
0.470
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.469
MDOA014797
Musca domestica
MDOA014797
I
0.469
Smp_148930
Schistosoma mansoni
Smp_148930
N
0.468
gw1.6.1665.1
Ostreococcus RCC809
gw1.6.1665.1
I
0.468
Sjc_0035580
Schistosoma japonicum
Sjc_0035580
N
0.468
A_01848
Schistosoma haematobium
A_01848
N
0.468
SCUD_0000070901
Schistosoma curassoni
SCUD_0000070901
N
0.468
SMTD_0001155301
Schistosoma mattheei
SMTD_0001155301
N
0.468
RSKR_0000269500
Rhabditophanes kr3021
RSKR_0000269500
N
0.467
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
0.463
ALUE_0000448701
Ascaris lumbricoides
ALUE_0000448701
N
0.462
ASU_05752
Ascaris suum
ASU_05752
N
0.462
csin108029
Clonorchis sinensis
csin108029
N
0.462
T265_15460
Opisthorchis viverrini
T265_15460
N
0.462
WUBG_02390
Wuchereria bancrofti
WUBG_02390
N
0.459
WBGene00237022
Onchocerca volvulus
WBGene00237022
N
0.459
BTMF_0000229601
Brugia timori
BTMF_0000229601
N
0.459
EEL_0000629001
Elaeophora elaphi
EEL_0000629001
N
0.459
nOo.2.0.1.g01970
Onchocerca ochengi
nOo.2.0.1.g01970
N
0.459
OFLC_0000496201
Onchocerca flexuosa
OFLC_0000496201
N
0.459
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
0.456
GMDG_05273
Pseudogymnoascus destructans
GMDG_05273
I
0.455
V499_08602
Pseudogymnoascus pannorum
V499_08602
I
0.455
ANCDUO_24269
Ancylostoma duodenale
ANCDUO_24269
N
0.455
SVUK_0001721701
Strongylus vulgaris
SVUK_0001721701
N
0.455
hmg-3
Caenorhabditis elegans
WBGene00001973
N
0.452
CLEC003860
Cimex lectularius
CLEC003860
I
0.452
LCUP016801
Lucilia cuprina
LCUP016801
N
0.452
ASIM_0001147101
Anisakis simplex
ASIM_0001147101
N
0.452
A1O1_01197
Capronia coronata
A1O1_01197
I
0.450
A1O3_08778
Capronia epimyces
A1O3_08778
I
0.450
A1O7_01726
Cladophialophora yegresii
A1O7_01726
I
0.450
G647_10093
Cladophialophora carrionii
G647_10093
I
0.450
HMPREF1120_00213
Exophiala dermatitidis
HMPREF1120_00213
I
0.450
PV05_09944
Exophiala xenobiotica
PV05_09944
I
0.450
PV06_04154
Exophiala oligosperma
PV06_04154
I
0.450
PV11_09703
Exophiala sideris
PV11_09703
I
0.450
Z518_04911
Rhinocladiella mackenziei
Z518_04911
I
0.450
BXY_0253100
Bursaphelenchus xylophilus
BXY_0253100
N
0.450
EVEC_0000171701
Enterobius vermicularis
EVEC_0000171701
N
0.447
ACYPI006576
Acyrthosiphon pisum
ACYPI006576
I
0.446
BGIBMGA007393
Bombyx mori
BGIBMGA007393
N
0.446
HPBE_0001796801
Heligmosomoides bakeri
HPBE_0001796801
N
0.446
DME_0000590001
Dracunculus medinensis
DME_0000590001
N
0.445
PV08_04655
Exophiala spinifera
PV08_04655
I
0.444
ANCCAN_19939
Ancylostoma caninum
ANCCAN_19939
N
0.444
GPUH_0000029001
Gongylonema pulchrum
GPUH_0000029001
N
0.444
CBG20663
Caenorhabditis briggsae
CBG20663
N
0.443
HmgD
Drosophila melanogaster
FBgn0004362
N
0.441
HmgD
Drosophila yakuba
FBgn0068146
N
0.441
GG22136
Drosophila erecta
FBgn0114310
N
0.441
GH21124
Drosophila grimshawi
FBgn0128586
N
0.441
GI18728
Drosophila mojavensis
FBgn0141467
N
0.441
GL16947
Drosophila persimilis
FBgn0154551
N
0.441
GM15859
Drosophila sechellia
FBgn0170775
N
0.441
GD11622
Drosophila simulans
FBgn0183362
N
0.441
GJ21748
Drosophila virilis
FBgn0208866
N
0.441
GA30453
Drosophila pseudoobscura
FBgn0264590
N
0.441
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.441
GM13209
Drosophila sechellia
FBgn0168140
N
0.440
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.440
L889_g6592
Steinernema feltiae
L889_g6592
N
0.440
ENSOGAG00000026034
Otolemur garnettii
ENSOGAG00000026034
I
0.439
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.436
GF13265
Drosophila ananassae
FBgn0090297
N
0.435
GK15924
Drosophila willistoni
FBgn0217926
N
0.435
ASIM_0000156001
Anisakis simplex
ASIM_0000156001
N
0.433
AAEL011425
Aedes aegypti
AAEL011425
I
0.432
ADAC005122
Anopheles darlingi
ADAC005122
N
0.432
AGAP012334
Anopheles gambiae
AGAP012334
N
0.432
OIDMADRAFT_143526
Oidiodendron maius
OIDMADRAFT_143526
I
0.432
AALB010797
Anopheles albimanus
AALB010797
N
0.432
AARA003413
Anopheles arabiensis
AARA003413
N
0.432
ACHR003270
Anopheles christyi
ACHR003270
N
0.432
ACOM026236
Anopheles coluzzii
ACOM026236
N
0.432
ADIR000495
Anopheles dirus
ADIR000495
N
0.432
AEPI002535
Anopheles epiroticus
AEPI002535
N
0.432
AFUN009599
Anopheles funestus
AFUN009599
N
0.432
AMAM007083
Anopheles maculatus
AMAM007083
N
0.432
AMEC017787
Anopheles melas
AMEC017787
N
0.432
AQUA002990
Anopheles quadriannulatus
AQUA002990
N
0.432
WUBG_06999
Wuchereria bancrofti
WUBG_06999
N
0.431
PPA14042
Pristionchus pacificus
PPA14042
N
0.431
BTMF_0000420901
Brugia timori
BTMF_0000420901
N
0.431
GPUH_0002275001
Gongylonema pulchrum
GPUH_0002275001
N
0.431
TCLT_0000071201
Thelazia callipaeda
TCLT_0000071201
N
0.431
Ocbimv22006454m.g
Octopus bimaculoides
Ocbimv22006454m.g
N
0.430
ALUE_0001798401
Ascaris lumbricoides
ALUE_0001798401
N
0.430
ASIM_0000114801
Anisakis simplex
ASIM_0000114801
N
0.430
ASU_13985
Ascaris suum
ASU_13985
N
0.430
TCNE_0001783901
Toxocara canis
TCNE_0001783901
N
0.430
GK22092
Drosophila willistoni
FBgn0224077
N
0.427
OSTLU_31946
Ostreococcus lucimarinus
OSTLU_31946
I
0.427
ECPE_0001309901
Echinostoma caproni
ECPE_0001309901
N
0.427
MAL8P1.72
Plasmodium falciparum
MAL8P1.72
I
0.426
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.425
GL11071
Drosophila persimilis
FBgn0148681
N
0.425
MDOA009531
Musca domestica
MDOA009531
N
0.425
MBM_02410
Marssonina brunnea
MBM_02410
I
0.424
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.424
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.424
A1O5_06047
Cladophialophora psammophila
A1O5_06047
I
0.423
ENSOGAG00000031524
Otolemur garnettii
ENSOGAG00000031524
I
0.423
PV04_00198
Capronia semiimmersa
PV04_00198
I
0.423
PV07_09313
Cladophialophora immunda
PV07_09313
I
0.423
PV10_01993
Exophiala mesophila
PV10_01993
I
0.423
Z517_02317
Fonsecaea pedrosoi
Z517_02317
I
0.423
Z519_04692
Cladophialophora bantiana
Z519_04692
I
0.423
CpipJ_CPIJ002952
Culex pipiens
CpipJ_CPIJ002952
N
0.422
AAEL002381
Aedes aegypti
AAEL002381
N
0.422
AAEL011414
Aedes aegypti
AAEL011414
N
0.422
CPIJ002952
Culex quinquefasciatus
CPIJ002952
N
0.422
AMTR_s00046p00227790
Amborella trichopoda
AMTR_s00046p00227790
N
0.420
PBANKA_071290
Plasmodium berghei
PBANKA_071290
I
0.419
PY07077
Plasmodium yoelii
PY07077
I
0.419
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.417
estExt_fgenesh1_pg.C_2230007
Physcomitrella patens
estExt_fgenesh1_pg.C_2230007
I
0.417
AUEXF2481DRAFT_32739
Aureobasidium subglaciale
AUEXF2481DRAFT_32739
I
0.416
M437DRAFT_15090
Aureobasidium melanogenum
M437DRAFT_15090
I
0.416
SPU_023988
Strongylocentrotus purpuratus
SPU_023988
N
0.416
PKH_051400
Plasmodium knowlesi
PKH_051400
I
0.415
PVX_089520
Plasmodium vivax
PVX_089520
I
0.415