PBANKA_071290 (Plasmodium berghei)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PBANKA_071290 T331792_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.436 0.522
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.436 0.522
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.430 0.478
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.430 0.478
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PBANKA_071290:pep Sox 24 94

Links

Other Sox family TFs
Other Plasmodium berghei TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PY07077 Plasmodium yoelii PY07077 I 0.741
PVX_089520 Plasmodium vivax PVX_089520 I 0.717
PCHAS_072200 Plasmodium chabaudi PCHAS_072200 I 0.708
MAL8P1.72 Plasmodium falciparum MAL8P1.72 I 0.695
PKH_051400 Plasmodium knowlesi PKH_051400 I 0.685
PBANKA_060190 Plasmodium berghei PBANKA_060190 I 0.497
PCHAS_060370 Plasmodium chabaudi PCHAS_060370 I 0.497
PFL0145c Plasmodium falciparum PFL0145c I 0.497
PY05184 Plasmodium yoelii PY05184 I 0.497
AAA27799.1 Babesia bovis AAA27799.1 I 0.496
CBF60306.1 Babesia bovis CBF60306.1 I 0.496
CBF61316.1 Babesia bovis CBF61316.1 I 0.496
CBF61859.1 Babesia bovis CBF61859.1 I 0.496
CBF82108.1 Babesia bovis CBF82108.1 I 0.496
CBU85550.1 Babesia bovis CBU85550.1 I 0.496
CBU86344.1 Babesia bovis CBU86344.1 I 0.496
CBU86735.1 Babesia bovis CBU86735.1 I 0.496
CBV00234.1 Babesia bovis CBV00234.1 I 0.496
EDO05788.1 Babesia bovis EDO05788.1 I 0.496
TP03_0469 Theileria parva TP03_0469 I 0.494
TA04735 Theileria annulata TA04735 I 0.489
PKH_130170 Plasmodium knowlesi PKH_130170 I 0.488
PVX_084190 Plasmodium vivax PVX_084190 I 0.488
YALI0_C11671g Yarrowia lipolytica YALI0_C11671g I 0.478
CANTEDRAFT_110112 Candida tenuis CANTEDRAFT_110112 I 0.471
PGUG_05245 Candida guilliermondii PGUG_05245 I 0.456
PGUG_05245 Meyerozyma guilliermondii PGUG_05245 I 0.456
Kpol_1065p34 Vanderwaltozyma polyspora Kpol_1065p34 I 0.443
Kpol_376p1 Vanderwaltozyma polyspora Kpol_376p1 I 0.443
TDEL_0C04750 Torulaspora delbrueckii TDEL_0C04750 I 0.443
ZBAI_00368 Zygosaccharomyces bailii ZBAI_00368 I 0.443
ZBAI_05520 Zygosaccharomyces bailii ZBAI_05520 I 0.443
ZYRO0C15752g Zygosaccharomyces rouxii ZYRO0C15752g I 0.443
AACERI_AaceriADL310W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL310W I 0.436
AGOS_ADL310W Ashbya gossypii AGOS_ADL310W I 0.436
Ecym_7459 Eremothecium cymbalariae Ecym_7459 I 0.436
KLLA0_B12056g Kluyveromyces lactis KLLA0_B12056g I 0.436
KLTH0E14850g Lachancea thermotolerans KLTH0E14850g I 0.436
LALA0_S09e03686g Lachancea lanzarotensis LALA0_S09e03686g I 0.436
SKUD_180604 Saccharomyces kudriavzevii SKUD_180604 I 0.436
SU7_3651 Saccharomyces arboricola SU7_3651 I 0.436
TBLA_0I02240 Tetrapisispora blattae TBLA_0I02240 I 0.436
NHP6A Saccharomyces cerevisiae YPR052C D 0.436
22477_YPR052C Saccharomyces mikatae 22477_YPR052C I 0.436
25751_YPR052C Saccharomyces bayanus 25751_YPR052C I 0.436
KLTH0E14850g Kluyveromyces thermotolerans KLTH0E14850g I 0.436
Kwal_12539 Kluyveromyces waltii Kwal_12539 I 0.436
SAKL0B07150g Lachancea kluyveri SAKL0B07150g I 0.436
NDAI_0A05290 Naumovozyma dairenensis NDAI_0A05290 I 0.433
NCAS_0A11010 Naumovozyma castellii NCAS_0A11010 I 0.430
SKUD_201106 Saccharomyces kudriavzevii SKUD_201106 I 0.430
SU7_0186 Saccharomyces arboricola SU7_0186 I 0.430
NHP6B Saccharomyces cerevisiae YBR089C-A D 0.430
orange1.1g044275m.g Citrus sinensis orange1.1g044275m.g I 0.430
Scas_Contig667.17 Saccharomyces castellii Scas_Contig667.17 I 0.430
1377_YBR089C-A Saccharomyces paradoxus 1377_YBR089C-A I 0.430
2032_YBR089C-A Saccharomyces bayanus 2032_YBR089C-A I 0.430
906_YBR089C-A Saccharomyces mikatae 906_YBR089C-A I 0.430
Bcin11g04340 Botrytis cinerea Bcin11g04340 I 0.428
E5Q_00406 Mixia osmundae E5Q_00406 I 0.426
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N 0.426
CAGL0H08541g Candida glabrata CAGL0H08541g I 0.424
PV09_01265 Verruconis gallopava PV09_01265 I 0.424
TGME49_010410 Toxoplasma gondii TGME49_010410 I 0.424
NCLIV_043670 Neospora caninum NCLIV_043670 I 0.424
EDP44509.1 Malassezia globosa EDP44509.1 N 0.421
SEPMUDRAFT_150255 Sphaerulina musiva SEPMUDRAFT_150255 I 0.420
Minc03634 Meloidogyne incognita Minc03634 N 0.419
Minc04648 Meloidogyne incognita Minc04648 N 0.419
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.419
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.419
G210_1137 Candida maltosa G210_1137 I 0.418
GNLVRS01_PISO0M04390g Millerozyma farinosa GNLVRS01_PISO0M04390g I 0.418
HPODL_03671 Ogataea parapolymorpha HPODL_03671 I 0.418
KUCA_T00001555001 Kuraishia capsulata KUCA_T00001555001 I 0.418
PICST_23779 Scheffersomyces stipitis PICST_23779 I 0.418
SPAPADRAFT_62621 Spathaspora passalidarum SPAPADRAFT_62621 I 0.418
gww1.1.1.1342.1 Pichia stipitis gww1.1.1.1342.1 I 0.418
TPHA_0M01480 Tetrapisispora phaffii TPHA_0M01480 I 0.417
mgf014518m Mimulus guttatus mgf014518m I 0.417
TPHA_0A03740 Tetrapisispora phaffii TPHA_0A03740 I 0.416