CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GA30453
(
Drosophila pseudoobscura
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
FBgn0264590
T329831_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0306132
Sox
5
71
PKRPLSAYMLWLNSAREGIKRESPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKDFE
FBpp0306133
Sox
5
71
PKRPLSAYMLWLNSAREGIKRESPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKDFE
FBpp0306134
Sox
5
71
PKRPLSAYMLWLNSAREGIKRESPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKDFE
Links
Other
Sox
family TFs
Other
Drosophila pseudoobscura
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GL16947
Drosophila persimilis
FBgn0154551
N
0.741
HmgD
Drosophila melanogaster
FBgn0004362
N
0.709
HmgD
Drosophila yakuba
FBgn0068146
N
0.709
GG22136
Drosophila erecta
FBgn0114310
N
0.709
GH21124
Drosophila grimshawi
FBgn0128586
N
0.709
GI18728
Drosophila mojavensis
FBgn0141467
N
0.709
GM13209
Drosophila sechellia
FBgn0168140
N
0.709
GM15859
Drosophila sechellia
FBgn0170775
N
0.709
GD11622
Drosophila simulans
FBgn0183362
N
0.709
GJ21748
Drosophila virilis
FBgn0208866
N
0.709
GF13265
Drosophila ananassae
FBgn0090297
N
0.703
GK15924
Drosophila willistoni
FBgn0217926
N
0.703
MDOA009531
Musca domestica
MDOA009531
N
0.655
LCUP016801
Lucilia cuprina
LCUP016801
N
0.652
CpipJ_CPIJ002952
Culex pipiens
CpipJ_CPIJ002952
N
0.627
AAEL011414
Aedes aegypti
AAEL011414
N
0.627
CPIJ002952
Culex quinquefasciatus
CPIJ002952
N
0.627
ADAC005122
Anopheles darlingi
ADAC005122
N
0.616
AGAP012334
Anopheles gambiae
AGAP012334
N
0.616
AALB010797
Anopheles albimanus
AALB010797
N
0.616
AARA003413
Anopheles arabiensis
AARA003413
N
0.616
ACHR003270
Anopheles christyi
ACHR003270
N
0.616
ACOM026236
Anopheles coluzzii
ACOM026236
N
0.616
ADIR000495
Anopheles dirus
ADIR000495
N
0.616
AEPI002535
Anopheles epiroticus
AEPI002535
N
0.616
AFUN009599
Anopheles funestus
AFUN009599
N
0.616
AMAM007083
Anopheles maculatus
AMAM007083
N
0.616
AMEC017787
Anopheles melas
AMEC017787
N
0.616
AQUA002990
Anopheles quadriannulatus
AQUA002990
N
0.616
GI20867
Drosophila mojavensis
FBgn0143601
I
0.615
GJ20604
Drosophila virilis
FBgn0207743
I
0.615
GF11622
Drosophila ananassae
FBgn0088662
I
0.611
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.596
GL17523
Drosophila persimilis
FBgn0155126
I
0.596
GH20784
Drosophila grimshawi
FBgn0128247
I
0.588
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.584
HmgZ
Drosophila yakuba
FBgn0068145
I
0.584
GG20749
Drosophila erecta
FBgn0112936
I
0.584
GM15692
Drosophila sechellia
FBgn0170608
I
0.584
GD25171
Drosophila simulans
FBgn0196483
I
0.584
GK15658
Drosophila willistoni
FBgn0217663
I
0.584
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.583
MDOA014797
Musca domestica
MDOA014797
I
0.582
BGIBMGA007393
Bombyx mori
BGIBMGA007393
N
0.572
AAEL002381
Aedes aegypti
AAEL002381
N
0.563
KGM_13852
Danaus plexippus
KGM_13852
I
0.545
MCINX001064
Melitaea cinxia
MCINX001064
I
0.541
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.523
BGIBMGA005289
Bombyx mori
BGIBMGA005289
I
0.515
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.512
HCOI01420700
Haemonchus contortus
HCOI01420700
N
0.493
HCOI02106600
Haemonchus contortus
HCOI02106600
N
0.493
GB54571
Apis mellifera
GB54571
N
0.490
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.489
Cflo_11824--XP_001120264.1_APIME
Camponotus floridanus
Cflo_11824--XP_001120264.1_APIME
N
0.488
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.485
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.467
NECAME_16525
Necator americanus
NECAME_16525
N
0.467
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.467
ACEP16595
Atta cephalotes
ACEP16595
I
0.465
GK22092
Drosophila willistoni
FBgn0224077
N
0.465
CapteG172235
Capitella teleta
CapteG172235
I
0.462
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.462
Hsal_00538--XP_001120264.1_APIME
Harpegnathos saltator
Hsal_00538--XP_001120264.1_APIME
N
0.459
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.459
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.459
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.457
CBG09136
Caenorhabditis briggsae
CBG09136
N
0.451
EMIHUDRAFT_49282
Emiliania huxleyi
EMIHUDRAFT_49282
N
0.450
BGIBMGA005288
Bombyx mori
BGIBMGA005288
N
0.447
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.447
CRE03995
Caenorhabditis remanei
CRE03995
N
0.447
HMEL015307
Heliconius melpomene
HMEL015307
N
0.447
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.447
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
0.447
hmg-4
Caenorhabditis elegans
WBGene00001974
N
0.445
ASIS014204
Anopheles sinensis
ASIS014204
N
0.444
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.443
GL11071
Drosophila persimilis
FBgn0148681
N
0.443
Minc03634
Meloidogyne incognita
Minc03634
N
0.441
Minc04648
Meloidogyne incognita
Minc04648
N
0.441
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
0.441
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.441
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.440
PHUM125270
Pediculus humanus
PHUM125270
N
0.438
NV15871
Nasonia vitripennis
NV15871
N
0.437
TC012866
Tribolium castaneum
TC012866
N
0.436
Smp_148930
Schistosoma mansoni
Smp_148930
N
0.435
Sjc_0035580
Schistosoma japonicum
Sjc_0035580
N
0.435
A_01848
Schistosoma haematobium
A_01848
N
0.435
SCUD_0000070901
Schistosoma curassoni
SCUD_0000070901
N
0.435
SMTD_0001155301
Schistosoma mattheei
SMTD_0001155301
N
0.435
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.433
MDOA007633
Musca domestica
MDOA007633
N
0.433
TsM_000111500
Taenia solium
TsM_000111500
N
0.432
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.430
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.430
PPA06513
Pristionchus pacificus
PPA06513
N
0.429
scaffold98-EXSNAP2012.51
Pristionchus exspectatus
scaffold98-EXSNAP2012.51
N
0.429
CJA19030
Caenorhabditis japonica
CJA19030
N
0.426
CLEC003860
Cimex lectularius
CLEC003860
I
0.426
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.423
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.423
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.423
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.423
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.423
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.423
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.422
KGM_13851
Danaus plexippus
KGM_13851
N
0.418
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.417
ETH_00031100
Eimeria tenella
ETH_00031100
I
0.415