CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CBG04066
(
Caenorhabditis briggsae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CBG04066
T326846_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG04066
Sox
558
624
PKRAATAYFLWFNANRASLKEDGDTVPEVAKKGGAKWKEMSADDKKEWEQKAAQDKIRYENEMKEYK
Links
Other
Sox
family TFs
Other
Caenorhabditis briggsae
TFs
232 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE03995
Caenorhabditis remanei
CRE03995
N
0.700
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.637
NECAME_16525
Necator americanus
NECAME_16525
N
0.590
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.590
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.590
CBG09136
Caenorhabditis briggsae
CBG09136
N
0.566
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.566
hmg-4
Caenorhabditis elegans
WBGene00001974
N
0.566
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.565
hmg-3
Caenorhabditis elegans
WBGene00001973
N
0.559
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.557
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
0.545
CJA19030
Caenorhabditis japonica
CJA19030
N
0.540
HCOI02106600
Haemonchus contortus
HCOI02106600
N
0.535
HCOI01420700
Haemonchus contortus
HCOI01420700
N
0.535
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.534
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.534
scaffold98-EXSNAP2012.51
Pristionchus exspectatus
scaffold98-EXSNAP2012.51
N
0.534
PPA06513
Pristionchus pacificus
PPA06513
N
0.534
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.534
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.534
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.534
TsM_000111500
Taenia solium
TsM_000111500
N
0.530
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.529
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.529
MDOA007633
Musca domestica
MDOA007633
N
0.522
GK22092
Drosophila willistoni
FBgn0224077
N
0.522
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.518
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.511
ANCCAN_08230
Ancylostoma caninum
ANCCAN_08230
I
0.506
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.502
SMUV_0000499601
Syphacia muris
SMUV_0000499601
N
0.500
PPA02261
Pristionchus pacificus
PPA02261
N
0.500
scaffold164-EXSNAP2012.19
Pristionchus exspectatus
scaffold164-EXSNAP2012.19
N
0.500
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.499
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.499
SSTP_0000585600
Strongyloides stercoralis
SSTP_0000585600
N
0.498
SPAL_0001085700
Strongyloides papillosus
SPAL_0001085700
N
0.498
PTRK_0001161700
Parastrongyloides trichosuri
PTRK_0001161700
N
0.498
SVE_0954900
Strongyloides venezuelensis
SVE_0954900
N
0.498
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
0.497
L889_g16198
Steinernema feltiae
L889_g16198
N
0.497
Minc04648
Meloidogyne incognita
Minc04648
N
0.497
Minc03634
Meloidogyne incognita
Minc03634
N
0.497
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.497
L898_g7743
Steinernema monticolum
L898_g7743
N
0.497
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.496
GE11532
Drosophila yakuba
FBgn0229332
N
0.495
GJ21774
Drosophila virilis
FBgn0208892
N
0.495
GG19998
Drosophila erecta
FBgn0112197
N
0.495
RSKR_0000746900
Rhabditophanes kr3021
RSKR_0000746900
N
0.495
HMEL015307
Heliconius melpomene
HMEL015307
N
0.492
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.491
L893_g23503
Steinernema glaseri
L893_g23503
N
0.491
ANCDUO_26276
Ancylostoma duodenale
ANCDUO_26276
N
0.491
GF12460
Drosophila ananassae
FBgn0089497
N
0.490
GD25013
Drosophila simulans
FBgn0196325
N
0.490
Ssrp
Drosophila melanogaster
FBgn0010278
N
0.490
SSTP_0000790100
Strongyloides stercoralis
SSTP_0000790100
N
0.490
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.489
ECANG7_00770
Echinococcus canadensis
ECANG7_00770
N
0.488
EmuJ_000894800
Echinococcus multilocularis
EmuJ_000894800
N
0.488
EVEC_0000195001
Enterobius vermicularis
EVEC_0000195001
N
0.488
BGIBMGA005288
Bombyx mori
BGIBMGA005288
N
0.484
RSKR_0000128800
Rhabditophanes kr3021
RSKR_0000128800
N
0.483
EVEC_0000079801
Enterobius vermicularis
EVEC_0000079801
N
0.483
ANCCAN_04253
Ancylostoma caninum
ANCCAN_04253
N
0.483
LCUP005047
Lucilia cuprina
LCUP005047
N
0.481
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.481
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.481
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.481
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.481
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.481
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.481
GH21151
Drosophila grimshawi
FBgn0128613
N
0.481
NECAME_17555
Necator americanus
NECAME_17555
N
0.481
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.481
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.481
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.481
NECAME_17981
Necator americanus
NECAME_17981
N
0.481
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.481
ASU_05994
Ascaris suum
ASU_05994
N
0.480
ASIM_0001178701
Anisakis simplex
ASIM_0001178701
N
0.480
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.480
GI18750
Drosophila mojavensis
FBgn0141489
N
0.479
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.478
SVE_0536900
Strongyloides venezuelensis
SVE_0536900
N
0.477
SPAL_0001421900
Strongyloides papillosus
SPAL_0001421900
N
0.477
SMUV_0000856901
Syphacia muris
SMUV_0000856901
N
0.476
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.475
L893_g29974
Steinernema glaseri
L893_g29974
N
0.475
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.475
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.475
L898_g4830
Steinernema monticolum
L898_g4830
N
0.475
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.475
gw1.6.1665.1
Ostreococcus RCC809
gw1.6.1665.1
I
0.474
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.474
ALUE_0000365901
Ascaris lumbricoides
ALUE_0000365901
N
0.473
TCNE_0000332201
Toxocara canis
TCNE_0000332201
N
0.473
ASU_09087
Ascaris suum
ASU_09087
N
0.473
L889_g9094
Steinernema feltiae
L889_g9094
N
0.473
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.472
L893_g3116
Steinernema glaseri
L893_g3116
N
0.472
Minc10016
Meloidogyne incognita
Minc10016
N
0.472
Minc01744
Meloidogyne incognita
Minc01744
N
0.472
CRE11852
Caenorhabditis remanei
CRE11852
N
0.471
CJA04355
Caenorhabditis japonica
CJA04355
N
0.471
Hsal_00538--XP_001120264.1_APIME
Harpegnathos saltator
Hsal_00538--XP_001120264.1_APIME
N
0.469
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.469
Cflo_11824--XP_001120264.1_APIME
Camponotus floridanus
Cflo_11824--XP_001120264.1_APIME
N
0.469
L892_g26355
Steinernema scapterisci
L892_g26355
N
0.467
AAEL011425
Aedes aegypti
AAEL011425
I
0.467
L892_g15959
Steinernema scapterisci
L892_g15959
N
0.467
MhA1_Contig2971.frz3.fgene1
Meloidogyne hapla
MhA1_Contig2971.frz3.fgene1
N
0.466
MhA1_Contig128.frz3.gene5
Meloidogyne hapla
MhA1_Contig128.frz3.gene5
N
0.466
PTRK_0000111400
Parastrongyloides trichosuri
PTRK_0000111400
N
0.465
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.464
KGM_13851
Danaus plexippus
KGM_13851
N
0.464
L889_g29516
Steinernema feltiae
L889_g29516
N
0.463
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.462
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
0.462
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.462
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.462
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.462
Ppa-hmg-1.1
Pristionchus pacificus
PPA22767
N
0.460
scaffold113-EXSNAP2012.49
Pristionchus exspectatus
scaffold113-EXSNAP2012.49
N
0.460
scaffold1425-EXSNAP2012.3
Pristionchus exspectatus
scaffold1425-EXSNAP2012.3
N
0.460
TELCIR_05217
Teladorsagia circumcincta
TELCIR_05217
N
0.459
HPLM_0000803901
Haemonchus placei
HPLM_0000803901
N
0.459
TELCIR_22690
Teladorsagia circumcincta
TELCIR_22690
N
0.459
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.459
HCOI00417600
Haemonchus contortus
HCOI00417600
N
0.459
GF11622
Drosophila ananassae
FBgn0088662
I
0.457
GG20749
Drosophila erecta
FBgn0112936
I
0.457
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.457
GD25171
Drosophila simulans
FBgn0196483
I
0.457
Sakowv30021656m.g
Saccoglossus kowalevskii
Sakowv30021656m.g
N
0.457
GM15692
Drosophila sechellia
FBgn0170608
I
0.457
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.457
HmgZ
Drosophila yakuba
FBgn0068145
I
0.457
GK15658
Drosophila willistoni
FBgn0217663
I
0.457
T265_15460
Opisthorchis viverrini
T265_15460
N
0.456
csin108029
Clonorchis sinensis
csin108029
N
0.456
NBR_0001132501
Nippostrongylus brasiliensis
NBR_0001132501
N
0.453
HPBE_0002310801
Heligmosomoides bakeri
HPBE_0002310801
N
0.453
SVUK_0001398701
Strongylus vulgaris
SVUK_0001398701
N
0.453
NECAME_10840
Necator americanus
NECAME_10840
N
0.453
ANCDUO_11855
Ancylostoma duodenale
ANCDUO_11855
N
0.453
DICVIV_01337
Dictyocaulus viviparus
DICVIV_01337
N
0.453
ANCCEY_10464
Ancylostoma ceylanicum
ANCCEY_10464
N
0.453
ANCCAN_21637
Ancylostoma caninum
ANCCAN_21637
N
0.453
ECPE_0001309901
Echinostoma caproni
ECPE_0001309901
N
0.453
LOAG_08062
Loa loa
LOAG_08062
N
0.452
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.452
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.452
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.452
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.452
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.452
GJ20604
Drosophila virilis
FBgn0207743
I
0.452
GI20867
Drosophila mojavensis
FBgn0143601
I
0.452
GH20784
Drosophila grimshawi
FBgn0128247
I
0.452
GL17523
Drosophila persimilis
FBgn0155126
I
0.452
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.452
Bm8632
Brugia malayi
Bm8632
N
0.452
ACOC_0000653601
Angiostrongylus costaricensis
ACOC_0000653601
N
0.448
L596_g20063
Steinernema carpocapsae
L596_g20063
N
0.448
PPA14042
Pristionchus pacificus
PPA14042
N
0.448
ACAC_0000857301
Angiostrongylus cantonensis
ACAC_0000857301
N
0.448
GI18728
Drosophila mojavensis
FBgn0141467
N
0.447
GK15924
Drosophila willistoni
FBgn0217926
N
0.447
HmgD
Drosophila melanogaster
FBgn0004362
N
0.447
GD11622
Drosophila simulans
FBgn0183362
N
0.447
GJ21748
Drosophila virilis
FBgn0208866
N
0.447
GM13209
Drosophila sechellia
FBgn0168140
N
0.447
GL16947
Drosophila persimilis
FBgn0154551
N
0.447
GH21124
Drosophila grimshawi
FBgn0128586
N
0.447
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
0.447
HmgD
Drosophila yakuba
FBgn0068146
N
0.447
GA30453
Drosophila pseudoobscura
FBgn0264590
N
0.447
GM15859
Drosophila sechellia
FBgn0170775
N
0.447
GF13265
Drosophila ananassae
FBgn0090297
N
0.447
GG22136
Drosophila erecta
FBgn0114310
N
0.447
MDOA014797
Musca domestica
MDOA014797
I
0.446
ACYPI006576
Acyrthosiphon pisum
ACYPI006576
I
0.445
RSKR_0000269200
Rhabditophanes kr3021
RSKR_0000269200
N
0.444
EVEC_0000171701
Enterobius vermicularis
EVEC_0000171701
N
0.444
ML09221a
Mnemiopsis leidyi
ML09221a
N
0.444
L798_13679
Zootermopsis nevadensis
L798_13679
N
0.440
CLEC003860
Cimex lectularius
CLEC003860
I
0.437
RSKR_0000540800
Rhabditophanes kr3021
RSKR_0000540800
N
0.436
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.436
GL11071
Drosophila persimilis
FBgn0148681
N
0.436
RSKR_0000171200
Rhabditophanes kr3021
RSKR_0000171200
N
0.436
BGIBMGA005289
Bombyx mori
BGIBMGA005289
I
0.435
GB54571
Apis mellifera
GB54571
N
0.435
nDi.2.2.2.g04713
Dirofilaria immitis
nDi.2.2.2.g04713
N
0.433
nLs.2.1.2.g02941
Litomosoides sigmodontis
nLs.2.1.2.g02941
N
0.433
MCINX001064
Melitaea cinxia
MCINX001064
I
0.430
MDOA009531
Musca domestica
MDOA009531
N
0.429
GPUH_0001272801
Gongylonema pulchrum
GPUH_0001272801
N
0.428
GPUH_0001539601
Gongylonema pulchrum
GPUH_0001539601
N
0.428
nOo.2.0.1.g02324
Onchocerca ochengi
nOo.2.0.1.g02324
N
0.428
WBGene00244511
Onchocerca volvulus
WBGene00244511
N
0.428
OCS_01486
Ophiocordyceps sinensis
OCS_01486
I
0.428
KGM_13852
Danaus plexippus
KGM_13852
I
0.426
EDI_049480
Entamoeba dispar
EDI_049480
N
0.425
AALB010796
Anopheles albimanus
AALB010796
N
0.424
ADAC005115
Anopheles darlingi
ADAC005115
N
0.424
RSKR_0000587700
Rhabditophanes kr3021
RSKR_0000587700
N
0.423
Bm6643
Brugia malayi
Bm6643
N
0.423
nDi.2.2.2.g07477
Dirofilaria immitis
nDi.2.2.2.g07477
N
0.423
SAPIO_CDS3132
Scedosporium apiospermum
SAPIO_CDS3132
N
0.422
Bm2524
Brugia malayi
Bm2524
N
0.422
AMAG_02260
Allomyces macrogynus
AMAG_02260
N
0.421
AMAG_00757
Allomyces macrogynus
AMAG_00757
N
0.421
HNAJ_0000793101
Hymenolepis nana
HNAJ_0000793101
I
0.421
PVAR5_1404
Byssochlamys spectabilis
PVAR5_1404
N
0.420
TC012866
Tribolium castaneum
TC012866
N
0.420
ASU_07820
Ascaris suum
ASU_07820
N
0.419
CapteG172235
Capitella teleta
CapteG172235
I
0.419
ALUE_0000605501
Ascaris lumbricoides
ALUE_0000605501
N
0.419
WUBG_03677
Wuchereria bancrofti
WUBG_03677
N
0.416
LOAG_04347
Loa loa
LOAG_04347
N
0.416
TCLT_0000097001
Thelazia callipaeda
TCLT_0000097001
N
0.416
EEL_0000829801
Elaeophora elaphi
EEL_0000829801
N
0.416
OFLC_0000770701
Onchocerca flexuosa
OFLC_0000770701
N
0.416
L889_g6592
Steinernema feltiae
L889_g6592
N
0.416
nLs.2.1.2.g07238
Litomosoides sigmodontis
nLs.2.1.2.g07238
N
0.416
nAv.1.0.1.g03971
Acanthocheilonema viteae
nAv.1.0.1.g03971
N
0.416
EHI_045480
Entamoeba histolytica
EHI_045480
N
0.415
Gorai.008G147700
Gossypium raimondii
Gorai.008G147700
I
0.415
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.415