CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIBMGA005289
(
Bombyx mori
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
BGIBMGA005289
T326565_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.445
0.448
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA005289-TA
Sox
5
71
PKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDKTEWEQKAAKAKEQYAKDLESYN
Links
Other
Sox
family TFs
Other
Bombyx mori
TFs
194 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KGM_13852
Danaus plexippus
KGM_13852
I
0.698
MCINX001064
Melitaea cinxia
MCINX001064
I
0.694
BGIBMGA007393
Bombyx mori
BGIBMGA007393
N
0.655
CapteG172235
Capitella teleta
CapteG172235
I
0.580
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.576
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.575
CpipJ_CPIJ002952
Culex pipiens
CpipJ_CPIJ002952
N
0.574
AAEL002381
Aedes aegypti
AAEL002381
N
0.574
AAEL011414
Aedes aegypti
AAEL011414
N
0.574
ADAC005122
Anopheles darlingi
ADAC005122
N
0.574
AGAP012334
Anopheles gambiae
AGAP012334
N
0.574
CPIJ002952
Culex quinquefasciatus
CPIJ002952
N
0.574
AALB010797
Anopheles albimanus
AALB010797
N
0.574
AARA003413
Anopheles arabiensis
AARA003413
N
0.574
ACHR003270
Anopheles christyi
ACHR003270
N
0.574
ACOM026236
Anopheles coluzzii
ACOM026236
N
0.574
ADIR000495
Anopheles dirus
ADIR000495
N
0.574
AEPI002535
Anopheles epiroticus
AEPI002535
N
0.574
AFUN009599
Anopheles funestus
AFUN009599
N
0.574
AMAM007083
Anopheles maculatus
AMAM007083
N
0.574
AMEC017787
Anopheles melas
AMEC017787
N
0.574
AQUA002990
Anopheles quadriannulatus
AQUA002990
N
0.574
GH20784
Drosophila grimshawi
FBgn0128247
I
0.569
GI20867
Drosophila mojavensis
FBgn0143601
I
0.569
GJ20604
Drosophila virilis
FBgn0207743
I
0.569
MDOA009531
Musca domestica
MDOA009531
N
0.565
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.564
HmgZ
Drosophila yakuba
FBgn0068145
I
0.564
GF11622
Drosophila ananassae
FBgn0088662
I
0.564
GG20749
Drosophila erecta
FBgn0112936
I
0.564
GM15692
Drosophila sechellia
FBgn0170608
I
0.564
GD25171
Drosophila simulans
FBgn0196483
I
0.564
GK15658
Drosophila willistoni
FBgn0217663
I
0.564
MDOA014797
Musca domestica
MDOA014797
I
0.563
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.561
GL17523
Drosophila persimilis
FBgn0155126
I
0.561
HmgD
Drosophila melanogaster
FBgn0004362
N
0.547
HmgD
Drosophila yakuba
FBgn0068146
N
0.547
GG22136
Drosophila erecta
FBgn0114310
N
0.547
GH21124
Drosophila grimshawi
FBgn0128586
N
0.547
GI18728
Drosophila mojavensis
FBgn0141467
N
0.547
GM15859
Drosophila sechellia
FBgn0170775
N
0.547
GD11622
Drosophila simulans
FBgn0183362
N
0.547
GJ21748
Drosophila virilis
FBgn0208866
N
0.547
GM13209
Drosophila sechellia
FBgn0168140
N
0.546
GF13265
Drosophila ananassae
FBgn0090297
N
0.541
GK15924
Drosophila willistoni
FBgn0217926
N
0.541
LCUP016801
Lucilia cuprina
LCUP016801
N
0.536
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.535
GL16947
Drosophila persimilis
FBgn0154551
N
0.515
GA30453
Drosophila pseudoobscura
FBgn0264590
N
0.515
CLEC003860
Cimex lectularius
CLEC003860
I
0.508
Cflo_11824--XP_001120264.1_APIME
Camponotus floridanus
Cflo_11824--XP_001120264.1_APIME
N
0.507
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.493
GL11071
Drosophila persimilis
FBgn0148681
N
0.493
ACEP16595
Atta cephalotes
ACEP16595
I
0.490
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.485
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.485
EHI_045480
Entamoeba histolytica
EHI_045480
N
0.485
EDI_049480
Entamoeba dispar
EDI_049480
N
0.485
Minc03634
Meloidogyne incognita
Minc03634
N
0.483
Minc04648
Meloidogyne incognita
Minc04648
N
0.483
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
0.483
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.483
GB54571
Apis mellifera
GB54571
N
0.481
Hsal_00538--XP_001120264.1_APIME
Harpegnathos saltator
Hsal_00538--XP_001120264.1_APIME
N
0.478
ML09221a
Mnemiopsis leidyi
ML09221a
N
0.474
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.474
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.473
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.473
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.468
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.468
TsM_000111500
Taenia solium
TsM_000111500
N
0.468
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.466
ssrp1a
Danio rerio
ENSDARG00000037397
I
0.465
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.461
AAEL011425
Aedes aegypti
AAEL011425
I
0.460
Ssrp
Drosophila melanogaster
FBgn0010278
N
0.460
GF12460
Drosophila ananassae
FBgn0089497
N
0.460
GD25013
Drosophila simulans
FBgn0196325
N
0.460
ASIS014204
Anopheles sinensis
ASIS014204
N
0.458
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.458
Smp_148930
Schistosoma mansoni
Smp_148930
N
0.456
Sjc_0035580
Schistosoma japonicum
Sjc_0035580
N
0.456
A_01848
Schistosoma haematobium
A_01848
N
0.456
SCUD_0000070901
Schistosoma curassoni
SCUD_0000070901
N
0.456
SMTD_0001155301
Schistosoma mattheei
SMTD_0001155301
N
0.456
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
0.456
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.455
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.455
GG19998
Drosophila erecta
FBgn0112197
N
0.455
GH21151
Drosophila grimshawi
FBgn0128613
N
0.455
GI18750
Drosophila mojavensis
FBgn0141489
N
0.455
GJ21774
Drosophila virilis
FBgn0208892
N
0.455
GE11532
Drosophila yakuba
FBgn0229332
N
0.455
MDOA007633
Musca domestica
MDOA007633
N
0.455
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.454
NECAME_16525
Necator americanus
NECAME_16525
N
0.454
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.454
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.453
NV15871
Nasonia vitripennis
NV15871
N
0.451
SPAL_0001421900
Strongyloides papillosus
SPAL_0001421900
N
0.451
SSTP_0000790100
Strongyloides stercoralis
SSTP_0000790100
N
0.451
SVE_0536900
Strongyloides venezuelensis
SVE_0536900
N
0.451
LotgiG207546
Lottia gigantea
LotgiG207546
N
0.450
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
0.450
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.450
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.449
estExt_fgenesh1_pg.C_2230007
Physcomitrella patens
estExt_fgenesh1_pg.C_2230007
I
0.447
L889_g29516
Steinernema feltiae
L889_g29516
N
0.447
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
0.447
RSKR_0000587700
Rhabditophanes kr3021
RSKR_0000587700
N
0.447
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.447
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.447
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.447
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
0.445
SMAC_00615
Sordaria macrospora
SMAC_00615
I
0.445
HMGB6
Vitis vinifera
VIT_10s0071g00870
I
0.445
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
0.445
NCU02819
Neurospora crassa
NCU02819
D
0.445
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.444
ANCCAN_08230
Ancylostoma caninum
ANCCAN_08230
I
0.443
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.443
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.443
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.443
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.443
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.443
ENSAMXG00000014826
Astyanax mexicanus
ENSAMXG00000014826
N
0.440
hmg-4
Caenorhabditis elegans
WBGene00001974
N
0.440
estExt_fgeneshMC_pm.C_110016
Mucor circinelloides
estExt_fgeneshMC_pm.C_110016
N
0.440
CBG09136
Caenorhabditis briggsae
CBG09136
N
0.438
L798_13679
Zootermopsis nevadensis
L798_13679
N
0.438
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.437
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.436
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.435
CRE03995
Caenorhabditis remanei
CRE03995
N
0.435
FFUJ_02729
Fusarium fujikuroi
FFUJ_02729
I
0.435
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.435
S40288_09735
Stachybotrys chartarum
S40288_09735
I
0.435
TCM_007659
Theobroma cacao
TCM_007659
I
0.434
KGM_13851
Danaus plexippus
KGM_13851
N
0.433
MAJ_04030
Metarhizium majus
MAJ_04030
I
0.432
MANI_030028
Metarhizium anisopliae
MANI_030028
I
0.432
MBR_01483
Metarhizium brunneum
MBR_01483
I
0.432
MGU_02157
Metarhizium guizhouense
MGU_02157
I
0.432
TC012866
Tribolium castaneum
TC012866
N
0.432
X797_001988
Metarhizium robertsii
X797_001988
I
0.432
PTRK_0000111400
Parastrongyloides trichosuri
PTRK_0000111400
N
0.432
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.429
CFIO01_13531
Colletotrichum fioriniae
CFIO01_13531
I
0.429
CGGC5_9539
Colletotrichum gloeosporioides
CGGC5_9539
I
0.429
CH063_04081
Colletotrichum higginsianum
CH063_04081
I
0.429
CSUB01_00364
Colletotrichum sublineola
CSUB01_00364
I
0.429
GLRG_01394
Colletotrichum graminicola
GLRG_01394
I
0.429
MGG_01641
Magnaporthe oryzae
MGG_01641
I
0.429
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.429
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.429
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.429
ACRE_011600
Acremonium chrysogenum
ACRE_011600
I
0.428
OSTLU_18991
Ostreococcus lucimarinus
OSTLU_18991
N
0.428
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.427
ECANG7_00770
Echinococcus canadensis
ECANG7_00770
N
0.426
EmuJ_000894800
Echinococcus multilocularis
EmuJ_000894800
N
0.426
BGIBMGA005288
Bombyx mori
BGIBMGA005288
N
0.425
HMEL015307
Heliconius melpomene
HMEL015307
N
0.425
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.425
THITE_2121767
Thielavia terrestris
THITE_2121767
I
0.425
GK22092
Drosophila willistoni
FBgn0224077
N
0.423
PTRK_0001161700
Parastrongyloides trichosuri
PTRK_0001161700
N
0.423
SPAL_0001085700
Strongyloides papillosus
SPAL_0001085700
N
0.423
SSTP_0000585600
Strongyloides stercoralis
SSTP_0000585600
N
0.423
SVE_0954900
Strongyloides venezuelensis
SVE_0954900
N
0.423
DAPPUDRAFT_201206
Daphnia pulex
DAPPUDRAFT_201206
N
0.420
OSTLU_31946
Ostreococcus lucimarinus
OSTLU_31946
I
0.419
HCOI01420700
Haemonchus contortus
HCOI01420700
N
0.419
HCOI02106600
Haemonchus contortus
HCOI02106600
N
0.419
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.417
L889_g9094
Steinernema feltiae
L889_g9094
N
0.417
ASU_05994
Ascaris suum
ASU_05994
N
0.416
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.416
CRE11852
Caenorhabditis remanei
CRE11852
N
0.415
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.415
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.415
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.415
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.415
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.415
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.415
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.415
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.415
L893_g29974
Steinernema glaseri
L893_g29974
N
0.415
L898_g4830
Steinernema monticolum
L898_g4830
N
0.415
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.415
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.415
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.415