CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP016801
(
Lucilia cuprina
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
LCUP016801
T334877_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP016801-PA
Sox
27
93
PKRPLSAYMIWLNSAREGIKRENPGIKVTEIAKKGGEIWRGMKDKSEWEAKAAKAKEDYEDAVKEFE
Links
Other
Sox
family TFs
Other
Lucilia cuprina
TFs
110 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HmgD
Drosophila melanogaster
FBgn0004362
N
0.685
HmgD
Drosophila yakuba
FBgn0068146
N
0.685
GG22136
Drosophila erecta
FBgn0114310
N
0.685
GH21124
Drosophila grimshawi
FBgn0128586
N
0.685
GI18728
Drosophila mojavensis
FBgn0141467
N
0.685
GM15859
Drosophila sechellia
FBgn0170775
N
0.685
GD11622
Drosophila simulans
FBgn0183362
N
0.685
GJ21748
Drosophila virilis
FBgn0208866
N
0.685
GM13209
Drosophila sechellia
FBgn0168140
N
0.684
GF13265
Drosophila ananassae
FBgn0090297
N
0.679
GK15924
Drosophila willistoni
FBgn0217926
N
0.679
MDOA009531
Musca domestica
MDOA009531
N
0.676
GL16947
Drosophila persimilis
FBgn0154551
N
0.652
GA30453
Drosophila pseudoobscura
FBgn0264590
N
0.652
CpipJ_CPIJ002952
Culex pipiens
CpipJ_CPIJ002952
N
0.649
AAEL011414
Aedes aegypti
AAEL011414
N
0.649
CPIJ002952
Culex quinquefasciatus
CPIJ002952
N
0.649
ADAC005122
Anopheles darlingi
ADAC005122
N
0.637
AGAP012334
Anopheles gambiae
AGAP012334
N
0.637
GI20867
Drosophila mojavensis
FBgn0143601
I
0.637
GJ20604
Drosophila virilis
FBgn0207743
I
0.637
AALB010797
Anopheles albimanus
AALB010797
N
0.637
AARA003413
Anopheles arabiensis
AARA003413
N
0.637
ACHR003270
Anopheles christyi
ACHR003270
N
0.637
ACOM026236
Anopheles coluzzii
ACOM026236
N
0.637
ADIR000495
Anopheles dirus
ADIR000495
N
0.637
AEPI002535
Anopheles epiroticus
AEPI002535
N
0.637
AFUN009599
Anopheles funestus
AFUN009599
N
0.637
AMAM007083
Anopheles maculatus
AMAM007083
N
0.637
AMEC017787
Anopheles melas
AMEC017787
N
0.637
AQUA002990
Anopheles quadriannulatus
AQUA002990
N
0.637
GF11622
Drosophila ananassae
FBgn0088662
I
0.632
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.609
GH20784
Drosophila grimshawi
FBgn0128247
I
0.609
GL17523
Drosophila persimilis
FBgn0155126
I
0.609
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.605
HmgZ
Drosophila yakuba
FBgn0068145
I
0.605
GG20749
Drosophila erecta
FBgn0112936
I
0.605
GM15692
Drosophila sechellia
FBgn0170608
I
0.605
GD25171
Drosophila simulans
FBgn0196483
I
0.605
GK15658
Drosophila willistoni
FBgn0217663
I
0.605
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.604
MDOA014797
Musca domestica
MDOA014797
I
0.603
BGIBMGA007393
Bombyx mori
BGIBMGA007393
N
0.593
AAEL002381
Aedes aegypti
AAEL002381
N
0.584
KGM_13852
Danaus plexippus
KGM_13852
I
0.566
MCINX001064
Melitaea cinxia
MCINX001064
I
0.562
GB54571
Apis mellifera
GB54571
N
0.541
BGIBMGA005289
Bombyx mori
BGIBMGA005289
I
0.536
Cflo_11824--XP_001120264.1_APIME
Camponotus floridanus
Cflo_11824--XP_001120264.1_APIME
N
0.509
ACEP16595
Atta cephalotes
ACEP16595
I
0.486
CapteG172235
Capitella teleta
CapteG172235
I
0.484
Hsal_00538--XP_001120264.1_APIME
Harpegnathos saltator
Hsal_00538--XP_001120264.1_APIME
N
0.481
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
0.480
HCOI01420700
Haemonchus contortus
HCOI01420700
N
0.475
HCOI02106600
Haemonchus contortus
HCOI02106600
N
0.475
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.475
ACYPI006576
Acyrthosiphon pisum
ACYPI006576
I
0.472
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.470
PHUM125270
Pediculus humanus
PHUM125270
N
0.468
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.468
ASIS014204
Anopheles sinensis
ASIS014204
N
0.465
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.464
GL11071
Drosophila persimilis
FBgn0148681
N
0.464
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.463
MDOA007633
Musca domestica
MDOA007633
N
0.462
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.462
TC012866
Tribolium castaneum
TC012866
N
0.457
estExt_fgenesh1_pg.C_2230007
Physcomitrella patens
estExt_fgenesh1_pg.C_2230007
I
0.455
Minc03634
Meloidogyne incognita
Minc03634
N
0.452
Minc04648
Meloidogyne incognita
Minc04648
N
0.452
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
0.452
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.452
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.451
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.451
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.451
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.451
AAEL011425
Aedes aegypti
AAEL011425
I
0.449
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.448
NECAME_16525
Necator americanus
NECAME_16525
N
0.448
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.448
CLEC003860
Cimex lectularius
CLEC003860
I
0.447
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.444
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.443
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.441
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.441
EMIHUDRAFT_49282
Emiliania huxleyi
EMIHUDRAFT_49282
N
0.439
Ssrp
Drosophila melanogaster
FBgn0010278
N
0.439
GD25013
Drosophila simulans
FBgn0196325
N
0.439
KGM_13851
Danaus plexippus
KGM_13851
N
0.439
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.437
GI18750
Drosophila mojavensis
FBgn0141489
N
0.436
GG19998
Drosophila erecta
FBgn0112197
N
0.435
GJ21774
Drosophila virilis
FBgn0208892
N
0.435
GE11532
Drosophila yakuba
FBgn0229332
N
0.435
GH21151
Drosophila grimshawi
FBgn0128613
N
0.434
L798_13679
Zootermopsis nevadensis
L798_13679
N
0.434
CBG09136
Caenorhabditis briggsae
CBG09136
N
0.432
BGIBMGA005288
Bombyx mori
BGIBMGA005288
N
0.431
GF12460
Drosophila ananassae
FBgn0089497
N
0.431
HMEL015307
Heliconius melpomene
HMEL015307
N
0.431
PPA06513
Pristionchus pacificus
PPA06513
N
0.431
scaffold98-EXSNAP2012.51
Pristionchus exspectatus
scaffold98-EXSNAP2012.51
N
0.431
GK22092
Drosophila willistoni
FBgn0224077
N
0.430
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.427
hmg-4
Caenorhabditis elegans
WBGene00001974
N
0.426
LCUP005047
Lucilia cuprina
LCUP005047
N
0.426
HNAJ_0000793101
Hymenolepis nana
HNAJ_0000793101
I
0.419
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.417
Solyc04g008820.2
Solanum lycopersicum
Solyc04g008820.2
I
0.415