PPA02261 (Pristionchus pacificus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PPA02261 T332168_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PPA02261 Sox 406 472

Links

Other Sox family TFs
Other Pristionchus pacificus TFs

215 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.741
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.604
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.603
CBN25379 Caenorhabditis brenneri CBN25379 I 0.572
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.563
Bm8632 Brugia malayi Bm8632 N 0.561
LOAG_08062 Loa loa LOAG_08062 N 0.561
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.561
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.561
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.561
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.561
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.561
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.561
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.551
ASU_05994 Ascaris suum ASU_05994 N 0.551
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.551
L889_g16198 Steinernema feltiae L889_g16198 N 0.547
L898_g7743 Steinernema monticolum L898_g7743 N 0.547
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.544
ASU_09087 Ascaris suum ASU_09087 N 0.544
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.544
ENSMMUG00000031258 Macaca mulatta ENSMMUG00000031258 I 0.542
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.541
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.541
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.541
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.541
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.541
L892_g23618 Steinernema scapterisci L892_g23618 N 0.541
L893_g23503 Steinernema glaseri L893_g23503 N 0.541
ENSCJAG00000031139 Callithrix jacchus ENSCJAG00000031139 I 0.539
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.539
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.538
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.538
L892_g19058 Steinernema scapterisci L892_g19058 N 0.538
L893_g29974 Steinernema glaseri L893_g29974 N 0.538
L898_g4830 Steinernema monticolum L898_g4830 N 0.538
ACEP16595 Atta cephalotes ACEP16595 I 0.537
L889_g9094 Steinernema feltiae L889_g9094 N 0.535
CJA04355 Caenorhabditis japonica CJA04355 N 0.534
ENSCJAG00000005187 Callithrix jacchus ENSCJAG00000005187 I 0.533
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.533
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.533
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.533
LCUP005047 Lucilia cuprina LCUP005047 N 0.532
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.532
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.532
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I 0.530
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.530
CRE11852 Caenorhabditis remanei CRE11852 N 0.528
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.527
NECAME_16525 Necator americanus NECAME_16525 N 0.527
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.527
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.526
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.523
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.523
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.523
ENSOGAG00000031524 Otolemur garnettii ENSOGAG00000031524 I 0.516
PPA06513 Pristionchus pacificus PPA06513 N 0.516
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.516
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.515
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.515
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.515
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.515
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.515
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.515
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.515
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.515
NECAME_17555 Necator americanus NECAME_17555 N 0.515
NECAME_17981 Necator americanus NECAME_17981 N 0.515
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.515
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.515
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.514
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.513
Minc01744 Meloidogyne incognita Minc01744 N 0.512
Minc10016 Meloidogyne incognita Minc10016 N 0.512
ANCCAN_04253 Ancylostoma caninum ANCCAN_04253 N 0.507
MhA1_Contig128.frz3.gene5 Meloidogyne hapla MhA1_Contig128.frz3.gene5 N 0.506
MhA1_Contig2971.frz3.fgene1 Meloidogyne hapla MhA1_Contig2971.frz3.fgene1 N 0.506
RSKR_0000269500 Rhabditophanes kr3021 RSKR_0000269500 N 0.506
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.504
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.504
CBG04066 Caenorhabditis briggsae CBG04066 N 0.500
GK22092 Drosophila willistoni FBgn0224077 N 0.500
CBG09136 Caenorhabditis briggsae CBG09136 N 0.498
HMGB2 Ochotona princeps ENSOPRG00000010124 I 0.498
ENSMMUP00000037751 Macaca fascicularis ENSMMUP00000037751 N 0.498
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.498
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.498
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.495
TC012866 Tribolium castaneum TC012866 N 0.494
Minc03634 Meloidogyne incognita Minc03634 N 0.491
Minc04648 Meloidogyne incognita Minc04648 N 0.491
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.491
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.491
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.488
GL11071 Drosophila persimilis FBgn0148681 N 0.488
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I 0.486
CPIJ020011 Culex quinquefasciatus CPIJ020011 I 0.486
ENSOGAG00000034481 Otolemur garnettii ENSOGAG00000034481 N 0.486
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.484
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.484
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.484
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.484
CRE03995 Caenorhabditis remanei CRE03995 N 0.483
ADAC005115 Anopheles darlingi ADAC005115 N 0.480
CJA19030 Caenorhabditis japonica CJA19030 N 0.480
AALB010796 Anopheles albimanus AALB010796 N 0.480
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.480
L889_g29516 Steinernema feltiae L889_g29516 N 0.479
PPA14042 Pristionchus pacificus PPA14042 N 0.475
ASIM_0001147101 Anisakis simplex ASIM_0001147101 N 0.473
ALUE_0001798401 Ascaris lumbricoides ALUE_0001798401 N 0.472
ASIM_0000114801 Anisakis simplex ASIM_0000114801 N 0.472
ASU_13985 Ascaris suum ASU_13985 N 0.472
TCNE_0001783901 Toxocara canis TCNE_0001783901 N 0.472
MDOA007633 Musca domestica MDOA007633 N 0.471
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.470
HCOI00417600 Haemonchus contortus HCOI00417600 N 0.466
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N 0.466
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N 0.466
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N 0.466
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.465
HMEL015307 Heliconius melpomene HMEL015307 N 0.465
GI18750 Drosophila mojavensis FBgn0141489 N 0.463
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N 0.460
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N 0.460
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N 0.460
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N 0.460
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N 0.460
NECAME_10840 Necator americanus NECAME_10840 N 0.460
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N 0.460
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.458
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N 0.457
CPIJ002953 Culex quinquefasciatus CPIJ002953 N 0.457
WBGene00244511 Onchocerca volvulus WBGene00244511 N 0.455
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N 0.455
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N 0.455
GPUH_0001272801 Gongylonema pulchrum GPUH_0001272801 N 0.455
GPUH_0001539601 Gongylonema pulchrum GPUH_0001539601 N 0.455
nOo.2.0.1.g02324 Onchocerca ochengi nOo.2.0.1.g02324 N 0.455
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N 0.454
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.452
ssrp1a Danio rerio ENSDARG00000037397 I 0.450
CLEC003860 Cimex lectularius CLEC003860 I 0.450
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.449
Bm2524 Brugia malayi Bm2524 N 0.448
Ssrp Drosophila melanogaster FBgn0010278 N 0.448
GF12460 Drosophila ananassae FBgn0089497 N 0.448
GD25013 Drosophila simulans FBgn0196325 N 0.448
EVEC_0000195001 Enterobius vermicularis EVEC_0000195001 N 0.448
mgf024995m Mimulus guttatus mgf024995m I 0.447
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.445
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N 0.444
GG19998 Drosophila erecta FBgn0112197 N 0.443
GJ21774 Drosophila virilis FBgn0208892 N 0.443
GE11532 Drosophila yakuba FBgn0229332 N 0.443
WUBG_03677 Wuchereria bancrofti WUBG_03677 N 0.442
LOAG_04347 Loa loa LOAG_04347 N 0.442
EEL_0000829801 Elaeophora elaphi EEL_0000829801 N 0.442
nAv.1.0.1.g03971 Acanthocheilonema viteae nAv.1.0.1.g03971 N 0.442
nDi.2.2.2.g07477 Dirofilaria immitis nDi.2.2.2.g07477 N 0.442
nLs.2.1.2.g07238 Litomosoides sigmodontis nLs.2.1.2.g07238 N 0.442
OFLC_0000770701 Onchocerca flexuosa OFLC_0000770701 N 0.442
KGM_13851 Danaus plexippus KGM_13851 N 0.441
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.441
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N 0.440
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N 0.440
RPRC006380 Rhodnius prolixus RPRC006380 I 0.438
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.438
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.438
CGI_10024258 Crassostrea gigas CGI_10024258 N 0.436
GH21151 Drosophila grimshawi FBgn0128613 N 0.436
SMUV_0000856901 Syphacia muris SMUV_0000856901 N 0.435
GA14726 Drosophila pseudoobscura FBgn0074753 I 0.432
GL17523 Drosophila persimilis FBgn0155126 I 0.432
L889_g6592 Steinernema feltiae L889_g6592 N 0.432
hmg-3 Caenorhabditis elegans WBGene00001973 N 0.431
PPAI002522 Phlebotomus papatasi PPAI002522 I 0.431
Bm6643 Brugia malayi Bm6643 N 0.430
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.430
TsM_000111500 Taenia solium TsM_000111500 N 0.430
EVEC_0000171701 Enterobius vermicularis EVEC_0000171701 N 0.428
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N 0.427
ASU_05752 Ascaris suum ASU_05752 N 0.427
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.426
ASU_07820 Ascaris suum ASU_07820 N 0.426
ENSAMXG00000014826 Astyanax mexicanus ENSAMXG00000014826 N 0.425
ENSDNOG00000037677 Dasypus novemcinctus ENSDNOG00000037677 N 0.425
GH20784 Drosophila grimshawi FBgn0128247 I 0.424
GI20867 Drosophila mojavensis FBgn0143601 I 0.424
GJ20604 Drosophila virilis FBgn0207743 I 0.424
gw1.6.1665.1 Ostreococcus RCC809 gw1.6.1665.1 I 0.424
SSLN_0000125101 Schistocephalus solidus SSLN_0000125101 N 0.424
AABR07009373.1 Rattus norvegicus ENSRNOG00000011429 I 0.423
SPAL_0001421900 Strongyloides papillosus SPAL_0001421900 N 0.421
SVE_0536900 Strongyloides venezuelensis SVE_0536900 N 0.421
ENSTBEG00000013604 Tupaia belangeri ENSTBEG00000013604 N 0.420
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.419
HmgZ Drosophila melanogaster FBgn0010228 I 0.419
HmgZ Drosophila yakuba FBgn0068145 I 0.419
GF11622 Drosophila ananassae FBgn0088662 I 0.419
GG20749 Drosophila erecta FBgn0112936 I 0.419
GM15692 Drosophila sechellia FBgn0170608 I 0.419
GD25171 Drosophila simulans FBgn0196483 I 0.419
GK15658 Drosophila willistoni FBgn0217663 I 0.419
ACHR003271 Anopheles christyi ACHR003271 I 0.419
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.418
MDOA014797 Musca domestica MDOA014797 I 0.418
ENSMMUG00000010106 Macaca mulatta ENSMMUG00000010106 I 0.417
SELMODRAFT_159743 Selaginella moellendorffii SELMODRAFT_159743 I 0.417
SELMODRAFT_166865 Selaginella moellendorffii SELMODRAFT_166865 I 0.417
AAEL011425 Aedes aegypti AAEL011425 I 0.415
Bcin01g08840 Botrytis cinerea Bcin01g08840 I 0.415
L889_g27280 Steinernema feltiae L889_g27280 N 0.415
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.415