CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf024995m
(
Mimulus guttatus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
mgf024995m
T334304_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.545
0.464
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf024995m
Sox
564
632
PKRAISAFMYFSQVERENLKKTNPGISFTDIARVLGERWHKMTADEKAPYEAKAKVDKKRYAEEISGYK
Links
Other
Sox
family TFs
Other
Mimulus guttatus
TFs
268 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OIDMADRAFT_143526
Oidiodendron maius
OIDMADRAFT_143526
I
0.580
mgf001267m
Mimulus guttatus
mgf001267m
I
0.561
GLYMA01G33240
Glycine max
GLYMA01G33240
I
0.558
Ca_12487
Cicer arietinum
Ca_12487
I
0.558
chr2.CM0225.40.nc
Lotus japonicus
chr2.CM0225.40.nc
I
0.558
LjSGA_094514.1
Lotus japonicus
LjSGA_094514.1
I
0.558
Gorai.006G024900
Gossypium raimondii
Gorai.006G024900
I
0.555
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.553
MBM_02410
Marssonina brunnea
MBM_02410
I
0.553
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.553
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.553
Cla017295
Citrullus lanatus
Cla017295
I
0.551
Cucsa.339070
Cucumis sativus
Cucsa.339070
I
0.551
Ca_10804
Cicer arietinum
Ca_10804
I
0.548
PK18077.1
Cannabis sativa
PK18077.1
I
0.547
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
0.545
PGSC0003DMG400001414
Solanum tuberosum
PGSC0003DMG400001414
I
0.545
PGSC0003DMG400018099
Solanum tuberosum
PGSC0003DMG400018099
I
0.545
SMAC_00615
Sordaria macrospora
SMAC_00615
I
0.545
Solyc02g087710.2
Solanum lycopersicum
Solyc02g087710.2
I
0.545
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
0.545
NCU02819
Neurospora crassa
NCU02819
D
0.545
MTR_5g082570
Medicago truncatula
MTR_5g082570
I
0.541
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.538
A1O1_01197
Capronia coronata
A1O1_01197
I
0.534
A1O3_08778
Capronia epimyces
A1O3_08778
I
0.534
A1O7_01726
Cladophialophora yegresii
A1O7_01726
I
0.534
G647_10093
Cladophialophora carrionii
G647_10093
I
0.534
HMPREF1120_00213
Exophiala dermatitidis
HMPREF1120_00213
I
0.534
PV05_09944
Exophiala xenobiotica
PV05_09944
I
0.534
PV06_04154
Exophiala oligosperma
PV06_04154
I
0.534
PV11_09703
Exophiala sideris
PV11_09703
I
0.534
Z518_04911
Rhinocladiella mackenziei
Z518_04911
I
0.534
SELMODRAFT_159743
Selaginella moellendorffii
SELMODRAFT_159743
I
0.531
SELMODRAFT_166865
Selaginella moellendorffii
SELMODRAFT_166865
I
0.531
HMPREF1541_06859
Cyphellophora europaea
HMPREF1541_06859
I
0.530
PV08_04655
Exophiala spinifera
PV08_04655
I
0.528
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.523
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
0.521
THITE_2121767
Thielavia terrestris
THITE_2121767
I
0.520
EV44_g2383
Erysiphe necator
EV44_g2383
I
0.519
AMTR_s00078p00107740
Amborella trichopoda
AMTR_s00078p00107740
I
0.517
GSMUA_Achr2G19630_001
Musa acuminata
GSMUA_Achr2G19630_001
I
0.517
MTR_1g022345
Medicago truncatula
MTR_1g022345
I
0.515
CTHT_0053790
Chaetomium thermophilum
CTHT_0053790
I
0.514
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.513
BGHDH14_bgh04339
Blumeria graminis
BGHDH14_bgh04339
I
0.509
PRUPE_ppa002690mg
Prunus persica
PRUPE_ppa002690mg
I
0.508
Pm015842
Prunus mume
Pm015842
I
0.508
A1O5_06047
Cladophialophora psammophila
A1O5_06047
I
0.507
PV04_00198
Capronia semiimmersa
PV04_00198
I
0.507
PV07_09313
Cladophialophora immunda
PV07_09313
I
0.507
PV10_01993
Exophiala mesophila
PV10_01993
I
0.507
Z517_02317
Fonsecaea pedrosoi
Z517_02317
I
0.507
Z519_04692
Cladophialophora bantiana
Z519_04692
I
0.507
CLEC003860
Cimex lectularius
CLEC003860
I
0.507
Bo7g091510
Brassica oleracea
Bo7g091510
N
0.506
Bra025350
Brassica rapa
Bra025350
N
0.506
F775_29723
Aegilops tauschii
F775_29723
I
0.505
MLOC_27773
Hordeum vulgare
MLOC_27773
I
0.505
Traes_1AS_3FCB35E65
Triticum aestivum
Traes_1AS_3FCB35E65
I
0.505
Traes_1BS_15F9D276D
Triticum aestivum
Traes_1BS_15F9D276D
I
0.505
Traes_1DS_C7F1E9F38
Triticum aestivum
Traes_1DS_C7F1E9F38
I
0.505
A1O9_00742
Exophiala aquamarina
A1O9_00742
I
0.502
MDP0000828844
Malus domestica
MDP0000828844
I
0.502
TCM_018380
Theobroma cacao
TCM_018380
I
0.499
GLYMA13G05140
Glycine max
GLYMA13G05140
I
0.494
CMQ_8074
Grosmannia clavigera
CMQ_8074
I
0.492
SPBR_04745
Sporothrix brasiliensis
SPBR_04745
I
0.492
CFIO01_13531
Colletotrichum fioriniae
CFIO01_13531
I
0.490
CGGC5_9539
Colletotrichum gloeosporioides
CGGC5_9539
I
0.490
CH063_04081
Colletotrichum higginsianum
CH063_04081
I
0.490
CSUB01_00364
Colletotrichum sublineola
CSUB01_00364
I
0.490
GLRG_01394
Colletotrichum graminicola
GLRG_01394
I
0.490
MGG_01641
Magnaporthe oryzae
MGG_01641
I
0.490
ATHMG
Arabidopsis lyrata
scaffold_500854.1
I
0.490
Bostr.0556s0524
Boechera stricta
Bostr.0556s0524
I
0.490
GLYMA03G03771
Glycine max
GLYMA03G03771
N
0.489
AUEXF2481DRAFT_32739
Aureobasidium subglaciale
AUEXF2481DRAFT_32739
I
0.487
M437DRAFT_15090
Aureobasidium melanogenum
M437DRAFT_15090
I
0.487
F503_04824
Ophiostoma piceae uamh
F503_04824
I
0.486
TRIVIDRAFT_228694
Trichoderma virens
TRIVIDRAFT_228694
I
0.486
AOL_s00076g81
Arthrobotrys oligospora
AOL_s00076g81
I
0.485
BATDEDRAFT_89692
Batrachochytrium dendrobatidis
BATDEDRAFT_89692
I
0.485
MAJ_04030
Metarhizium majus
MAJ_04030
I
0.485
MANI_030028
Metarhizium anisopliae
MANI_030028
I
0.485
MBR_01483
Metarhizium brunneum
MBR_01483
I
0.485
MGU_02157
Metarhizium guizhouense
MGU_02157
I
0.485
X797_001988
Metarhizium robertsii
X797_001988
I
0.485
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.483
ACRE_011600
Acremonium chrysogenum
ACRE_011600
I
0.483
ENSMMUG00000031258
Macaca mulatta
ENSMMUG00000031258
I
0.483
FFUJ_02729
Fusarium fujikuroi
FFUJ_02729
I
0.483
S40288_09735
Stachybotrys chartarum
S40288_09735
I
0.483
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.483
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.483
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.483
ATHMG
Vitis vinifera
VIT_14s0108g00040
I
0.483
gene01264-v1.0-hybrid
Fragaria vesca
gene01264-v1.0-hybrid
I
0.480
gene01265-v1.0-hybrid
Fragaria vesca
gene01265-v1.0-hybrid
I
0.480
BBA_01214
Beauveria bassiana
BBA_01214
I
0.479
Bra033055
Brassica rapa
Bra033055
N
0.479
CCM_01555
Cordyceps militaris
CCM_01555
I
0.479
BGIOSGA019295
Oryza indica
BGIOSGA019295
N
0.478
LPERR05G04880
Leersia perrieri
LPERR05G04880
N
0.478
OB05G15230
Oryza brachyantha
OB05G15230
N
0.478
OBART05G05520
Oryza barthii
OBART05G05520
N
0.478
OGLUM05G05400
Oryza glumaepatula
OGLUM05G05400
N
0.478
OLONG_012679
Oryza longistaminata
OLONG_012679
N
0.478
OMERI05G05210
Oryza meridionalis
OMERI05G05210
N
0.478
ONIVA05G05990
Oryza nivara
ONIVA05G05990
N
0.478
OPUNC05G05150
Oryza punctata
OPUNC05G05150
N
0.478
ORGLA05G0049600
Oryza glaberrima
ORGLA05G0049600
N
0.478
ORUFI05G05850
Oryza rufipogon
ORUFI05G05850
N
0.478
SSRP1-B
Oryza sativa
OS05G0182600
N
0.478
ENSCJAG00000005187
Callithrix jacchus
ENSCJAG00000005187
I
0.476
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.475
MDP0000310093
Malus domestica
MDP0000310093
I
0.473
BRADI2G33580
Brachypodium distachyon
BRADI2G33580
N
0.471
Ciclev10011266m.g
Citrus clementina
Ciclev10011266m.g
I
0.471
orange1.1g006512m.g
Citrus sinensis
orange1.1g006512m.g
I
0.471
SapurV1A.0447s0140
Salix purpurea
SapurV1A.0447s0140
I
0.470
V499_08602
Pseudogymnoascus pannorum
V499_08602
I
0.467
Thhalv10003803m.g
Eutrema salsugineum
Thhalv10003803m.g
I
0.465
EPUS_09213
Endocarpon pusillum
EPUS_09213
I
0.464
POPTR_0017s11460
Populus trichocarpa
POPTR_0017s11460
I
0.464
SOCG_02294
Schizosaccharomyces octosporus
SOCG_02294
I
0.464
M438DRAFT_338286
Aureobasidium pullulans
M438DRAFT_338286
I
0.462
SSRP1
Arabidopsis thaliana
AT3G28730
I
0.460
Cagra.0535s0005
Capsella grandiflora
Cagra.0535s0005
I
0.460
Carubv10016819m.g
Capsella rubella
Carubv10016819m.g
I
0.460
BGIOSGA002908
Oryza indica
BGIOSGA002908
N
0.459
LPERR01G05200
Leersia perrieri
LPERR01G05200
N
0.459
OB01G15440
Oryza brachyantha
OB01G15440
N
0.459
OBART01G05540
Oryza barthii
OBART01G05540
N
0.459
OGLUM01G06010
Oryza glumaepatula
OGLUM01G06010
N
0.459
OLONG_023518
Oryza longistaminata
OLONG_023518
N
0.459
OMERI01G05760
Oryza meridionalis
OMERI01G05760
N
0.459
ONIVA01G06280
Oryza nivara
ONIVA01G06280
N
0.459
OPUNC01G05380
Oryza punctata
OPUNC01G05380
N
0.459
OPUNC02G20230
Oryza punctata
OPUNC02G20230
N
0.459
ORGLA01G0051500
Oryza glaberrima
ORGLA01G0051500
N
0.459
ORUFI01G05970
Oryza rufipogon
ORUFI01G05970
N
0.459
SSRP1-A
Oryza sativa
OS01G0184900
N
0.459
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.458
GL11071
Drosophila persimilis
FBgn0148681
N
0.458
FPSE_02664
Fusarium pseudograminearum
FPSE_02664
I
0.458
SAPIO_CDS3355
Scedosporium apiospermum
SAPIO_CDS3355
I
0.457
COCSADRAFT_180514
Bipolaris sorokiniana
COCSADRAFT_180514
I
0.456
gw1.199.74.1
Physcomitrella patens
gw1.199.74.1
I
0.456
MDP0000301546
Malus domestica
MDP0000301546
I
0.456
SPOG_00531
Schizosaccharomyces cryophilus
SPOG_00531
I
0.455
Lus10018073.g
Linum usitatissimum
Lus10018073.g
N
0.455
Lus10042065.g
Linum usitatissimum
Lus10042065.g
N
0.455
PDK_20s1437671g003
Phoenix dactylifera
PDK_20s1437671g003
I
0.455
GMDG_05273
Pseudogymnoascus destructans
GMDG_05273
I
0.454
evm.TU.supercontig_211.6
Carica papaya
evm.TU.supercontig_211.6
I
0.454
DRE_06603
Drechslerella stenobrocha
DRE_06603
I
0.452
GRMZM2G032252
Zea mays
GRMZM2G032252
N
0.452
GSTUM_00011974001
Tuber melanosporum
GSTUM_00011974001
I
0.452
Sb03g003450
Sorghum bicolor
Sb03g003450
N
0.452
Si000646m.g
Setaria italica
Si000646m.g
N
0.452
VHEMI10573
Torrubiella hemipterigena
VHEMI10573
I
0.452
Pavir.Ea00282
Panicum virgatum
Pavir.Ea00282
N
0.452
Pavir.J08546
Panicum virgatum
Pavir.J08546
N
0.452
GGTG_01518
Gaeumannomyces graminis
GGTG_01518
I
0.451
MAPG_06737
Magnaporthe poae
MAPG_06737
I
0.451
COCC4DRAFT_135921
Bipolaris maydis
COCC4DRAFT_135921
I
0.449
COCMIDRAFT_97534
Bipolaris oryzae
COCMIDRAFT_97534
I
0.449
COCSADRAFT_226282
Bipolaris sorokiniana
COCSADRAFT_226282
I
0.449
COCVIDRAFT_17843
Bipolaris victoriae
COCVIDRAFT_17843
I
0.449
LEMA_P064360.1
Leptosphaeria maculans
LEMA_P064360.1
I
0.449
MPH_08050
Macrophomina phaseolina
MPH_08050
I
0.449
PTRG_02818
Pyrenophora triticirepentis
PTRG_02818
I
0.449
PTT_17082
Pyrenophora teres
PTT_17082
I
0.449
SETTUDRAFT_157792
Setosphaeria turcica
SETTUDRAFT_157792
I
0.449
W97_04202
Coniosporium apollinis
W97_04202
I
0.449
fgenesh1_pm.C_scaffold_14000132
Cochliobolus heterostrophus C5
fgenesh1_pm.C_scaffold_14000132
I
0.449
AB07914.1
Alternaria brassicicola
AB07914.1
I
0.449
PPA02261
Pristionchus pacificus
PPA02261
N
0.447
PV09_06887
Verruconis gallopava
PV09_06887
I
0.447
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.447
scaffold164-EXSNAP2012.19
Pristionchus exspectatus
scaffold164-EXSNAP2012.19
N
0.447
F775_28104
Aegilops tauschii
F775_28104
N
0.446
Traes_3AS_AAAAD30B5
Triticum aestivum
Traes_3AS_AAAAD30B5
N
0.446
TRAES3BF096800150CFD_g
Triticum aestivum
TRAES3BF096800150CFD_g
N
0.446
TRIUR3_14091
Triticum urartu
TRIUR3_14091
N
0.446
OCS_01486
Ophiocordyceps sinensis
OCS_01486
I
0.445
XP_002159252.1
Hydra magnipapillata
XP_002159252.1
I
0.445
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.444
TRIATDRAFT_321166
Trichoderma atroviride
TRIATDRAFT_321166
I
0.442
RO3G_07543
Rhizopus oryzae
RO3G_07543
I
0.439
ENSCJAG00000031139
Callithrix jacchus
ENSCJAG00000031139
I
0.439
tetur02g08250
Tetranychus urticae
tetur02g08250
N
0.439
M407DRAFT_81488
Tulasnella calospora
M407DRAFT_81488
I
0.436
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.435
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.435
AAEL011425
Aedes aegypti
AAEL011425
I
0.435
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.435
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.435
MVLG_07162
Microbotryum violaceum
MVLG_07162
I
0.435
29822.m003476
Ricinus communis
29822.m003476
I
0.435
GB47837
Apis mellifera
GB47837
N
0.434
SINV22588
Solenopsis invicta
SINV22588
N
0.434
Cflo_05893--XP_624266.1_APIME
Camponotus floridanus
Cflo_05893--XP_624266.1_APIME
N
0.434
Hsal_13112--XP_624266.1_APIME
Harpegnathos saltator
Hsal_13112--XP_624266.1_APIME
N
0.434
Bm8632
Brugia malayi
Bm8632
N
0.433
LOAG_08062
Loa loa
LOAG_08062
N
0.433
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.433
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.433
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.433
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.433
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.433
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.433
COCVIDRAFT_115390
Bipolaris victoriae
COCVIDRAFT_115390
I
0.431
HCOI01912600
Haemonchus contortus
HCOI01912600
I
0.430
HCOI01913300
Haemonchus contortus
HCOI01913300
I
0.430
GRMZM5G842484
Zea mays
GRMZM5G842484
N
0.429
Sb09g005650
Sorghum bicolor
Sb09g005650
N
0.429
Si024096m.g
Setaria italica
Si024096m.g
N
0.429
ACEP16595
Atta cephalotes
ACEP16595
I
0.428
ENSOGAG00000031524
Otolemur garnettii
ENSOGAG00000031524
I
0.428
HMGB2
Ochotona princeps
ENSOPRG00000010124
I
0.428
LCUP005047
Lucilia cuprina
LCUP005047
N
0.428
MLOC_6673
Hordeum vulgare
MLOC_6673
N
0.427
cassava42041.valid.m1
Manihot esculenta
cassava42041.valid.m1
I
0.427
L893_g23503
Steinernema glaseri
L893_g23503
N
0.427
ASIM_0001178701
Anisakis simplex
ASIM_0001178701
N
0.426
COCCADRAFT_24603
Bipolaris zeicola
COCCADRAFT_24603
I
0.424
GF12460
Drosophila ananassae
FBgn0089497
N
0.424
Kpol_1065p34
Vanderwaltozyma polyspora
Kpol_1065p34
I
0.424
TPHA_0A03740
Tetrapisispora phaffii
TPHA_0A03740
I
0.424
ENSCAFG00000016282
Canis familiaris
ENSCAFG00000016282
I
0.423
Si021575m.g
Setaria italica
Si021575m.g
N
0.423
Pavir.Ca01033
Panicum virgatum
Pavir.Ca01033
N
0.423
Pavir.J20558
Panicum virgatum
Pavir.J20558
N
0.423
RO3G_16060
Rhizopus oryzae
RO3G_16060
I
0.422
ENSOGAG00000026034
Otolemur garnettii
ENSOGAG00000026034
I
0.422
SJAG_03603
Schizosaccharomyces japonicus
SJAG_03603
I
0.422
Pavir.J10741
Panicum virgatum
Pavir.J10741
N
0.421
L898_g7743
Steinernema monticolum
L898_g7743
N
0.421
Eucgr.I01920
Eucalyptus grandis
Eucgr.I01920
N
0.420
ENSMMUP00000037751
Macaca fascicularis
ENSMMUP00000037751
N
0.419
estExt_Genewise1.C_10428
Volvox carteri
estExt_Genewise1.C_10428
N
0.418
ACHR003271
Anopheles christyi
ACHR003271
I
0.418
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.418
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.418
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.418
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.418
L893_g29974
Steinernema glaseri
L893_g29974
N
0.418
L898_g4830
Steinernema monticolum
L898_g4830
N
0.418
CRE11852
Caenorhabditis remanei
CRE11852
N
0.417
DRE_02237
Drechslerella stenobrocha
DRE_02237
N
0.417
TPHA_0M01480
Tetrapisispora phaffii
TPHA_0M01480
I
0.417
Ssrp
Drosophila melanogaster
FBgn0010278
N
0.416
GG19998
Drosophila erecta
FBgn0112197
N
0.416
GD25013
Drosophila simulans
FBgn0196325
N
0.416
GJ21774
Drosophila virilis
FBgn0208892
N
0.416
GE11532
Drosophila yakuba
FBgn0229332
N
0.416
MDOA007633
Musca domestica
MDOA007633
N
0.416
ASU_05994
Ascaris suum
ASU_05994
N
0.416
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.416
L889_g9094
Steinernema feltiae
L889_g9094
N
0.416
TCNE_0000332201
Toxocara canis
TCNE_0000332201
N
0.416
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.416
PGTG_04701
Puccinia graminis
PGTG_04701
I
0.415
PTTG_09594
Puccinia triticina
PTTG_09594
I
0.415
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.415