CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SINV22588
(
Solenopsis invicta
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SINV22588
T332574_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SINV22588-PA
Sox
138
206
PKRALSAFFYFCQELRGKMRELHPEMGVGDIAKELGKLWMSTDLQTKSKYMAIAEEDRARYEREIIAYN
Links
Other
Sox
family TFs
Other
Solenopsis invicta
TFs
122 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GB47837
Apis mellifera
GB47837
N
0.741
Cflo_05893--XP_624266.1_APIME
Camponotus floridanus
Cflo_05893--XP_624266.1_APIME
N
0.741
Hsal_13112--XP_624266.1_APIME
Harpegnathos saltator
Hsal_13112--XP_624266.1_APIME
N
0.735
ACEP16621
Atta cephalotes
ACEP16621
N
0.638
tetur02g08250
Tetranychus urticae
tetur02g08250
N
0.505
SNAPOd2T00016002001
Oikopleura dioica
SNAPOd2T00016002001
N
0.489
cassava23716.valid.m1
Manihot esculenta
cassava23716.valid.m1
I
0.486
SNAPOd2T00005164001
Oikopleura dioica
SNAPOd2T00005164001
N
0.476
HCOI01912600
Haemonchus contortus
HCOI01912600
I
0.470
HCOI01913300
Haemonchus contortus
HCOI01913300
I
0.470
ASIM_0001178701
Anisakis simplex
ASIM_0001178701
N
0.466
scaffold1425-EXSNAP2012.3
Pristionchus exspectatus
scaffold1425-EXSNAP2012.3
N
0.465
scaffold113-EXSNAP2012.49
Pristionchus exspectatus
scaffold113-EXSNAP2012.49
N
0.465
Ppa-hmg-1.1
Pristionchus pacificus
PPA22767
N
0.465
TCNE_0000332201
Toxocara canis
TCNE_0000332201
N
0.464
ASU_09087
Ascaris suum
ASU_09087
N
0.464
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.464
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.464
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.464
ALUE_0000365901
Ascaris lumbricoides
ALUE_0000365901
N
0.464
CJA04355
Caenorhabditis japonica
CJA04355
N
0.460
L889_g6592
Steinernema feltiae
L889_g6592
N
0.457
ASU_05994
Ascaris suum
ASU_05994
N
0.457
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.457
D915_02473
Fasciola hepatica
D915_02473
N
0.456
CRE11852
Caenorhabditis remanei
CRE11852
N
0.454
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.452
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.451
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.451
L893_g29974
Steinernema glaseri
L893_g29974
N
0.451
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.451
RSKR_0000587700
Rhabditophanes kr3021
RSKR_0000587700
N
0.451
L898_g4830
Steinernema monticolum
L898_g4830
N
0.451
L889_g9094
Steinernema feltiae
L889_g9094
N
0.448
GRMZM2G066528
Zea mays
GRMZM2G066528
I
0.446
ECPE_0000536801
Echinostoma caproni
ECPE_0000536801
N
0.446
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.445
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.445
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.445
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.445
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.445
Bm8632
Brugia malayi
Bm8632
N
0.445
LOAG_08062
Loa loa
LOAG_08062
N
0.445
L893_g23503
Steinernema glaseri
L893_g23503
N
0.444
L889_g16198
Steinernema feltiae
L889_g16198
N
0.444
L898_g7743
Steinernema monticolum
L898_g7743
N
0.444
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.444
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.442
TSTA_074230
Talaromyces stipitatus
TSTA_074230
N
0.438
ENSOGAG00000026034
Otolemur garnettii
ENSOGAG00000026034
I
0.437
Pavir.Ba01379
Panicum virgatum
Pavir.Ba01379
I
0.436
Pavir.Bb02550
Panicum virgatum
Pavir.Bb02550
I
0.436
OESDEN_24828
Oesophagostomum dentatum
OESDEN_24828
N
0.436
Sb02g032140
Sorghum bicolor
Sb02g032140
I
0.436
Si031512m.g
Setaria italica
Si031512m.g
I
0.436
mgf024995m
Mimulus guttatus
mgf024995m
I
0.434
SELMODRAFT_166865
Selaginella moellendorffii
SELMODRAFT_166865
I
0.431
SELMODRAFT_159743
Selaginella moellendorffii
SELMODRAFT_159743
I
0.431
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
0.429
GLYMA16G22060
Glycine max
GLYMA16G22060
I
0.427
GLYMA09G33070
Glycine max
GLYMA09G33070
I
0.427
AMAG_02260
Allomyces macrogynus
AMAG_02260
N
0.426
1400010135
Ostreococcus tauri
1400010135
I
0.426
evm.TU.supercontig_26.174
Carica papaya
evm.TU.supercontig_26.174
I
0.426
AMAG_00757
Allomyces macrogynus
AMAG_00757
N
0.426
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.425
MTR_5g082570
Medicago truncatula
MTR_5g082570
I
0.424
SMUV_0000499601
Syphacia muris
SMUV_0000499601
N
0.423
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.422
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.422
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.422
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.422
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.422
NECAME_17555
Necator americanus
NECAME_17555
N
0.422
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.422
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.422
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.422
Bra025350
Brassica rapa
Bra025350
N
0.422
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.422
NECAME_17981
Necator americanus
NECAME_17981
N
0.422
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.422
PK08788.1
Cannabis sativa
PK08788.1
N
0.422
gw1.6.1665.1
Ostreococcus RCC809
gw1.6.1665.1
I
0.421
ENSOGAG00000031524
Otolemur garnettii
ENSOGAG00000031524
I
0.421
HMGB2
Ochotona princeps
ENSOPRG00000010124
I
0.421
GSMUA_Achr2G11060_001
Musa acuminata
GSMUA_Achr2G11060_001
I
0.420
MDP0000275042
Malus domestica
MDP0000275042
I
0.420
OSTLU_18991
Ostreococcus lucimarinus
OSTLU_18991
N
0.419
evm.TU.supercontig_365.4
Carica papaya
evm.TU.supercontig_365.4
I
0.417
Solyc02g082700.2
Solanum lycopersicum
Solyc02g082700.2
I
0.417
PGSC0003DMG400001567
Solanum tuberosum
PGSC0003DMG400001567
I
0.417
OS09G0551600
Oryza sativa
OS09G0551600
I
0.417
TCM_000068
Theobroma cacao
TCM_000068
I
0.417
TCM_034406
Theobroma cacao
TCM_034406
I
0.417
VIT_04s0044g00110
Vitis vinifera
VIT_04s0044g00110
I
0.417
TRIUR3_27273
Triticum urartu
TRIUR3_27273
I
0.417
ORUFI09G20440
Oryza rufipogon
ORUFI09G20440
I
0.417
ORGLA09G0150800
Oryza glaberrima
ORGLA09G0150800
I
0.417
GLYMA06G01970
Glycine max
GLYMA06G01970
I
0.417
GLYMA04G01840
Glycine max
GLYMA04G01840
I
0.417
LPERR09G14820
Leersia perrieri
LPERR09G14820
I
0.417
OB09G25530
Oryza brachyantha
OB09G25530
I
0.417
ONIVA09G20030
Oryza nivara
ONIVA09G20030
I
0.417
OMERI09G14100
Oryza meridionalis
OMERI09G14100
I
0.417
VIT_18s0122g01190
Vitis vinifera
VIT_18s0122g01190
I
0.417
Cla009093
Citrullus lanatus
Cla009093
I
0.417
gene13043-v1.0-hybrid
Fragaria vesca
gene13043-v1.0-hybrid
I
0.417
Eucgr.F03571
Eucalyptus grandis
Eucgr.F03571
I
0.417
Ciclev10026715m.g
Citrus clementina
Ciclev10026715m.g
I
0.417
Gorai.002G115100
Gossypium raimondii
Gorai.002G115100
I
0.417
Gorai.005G114500
Gossypium raimondii
Gorai.005G114500
I
0.417
orange1.1g031973m.g
Citrus sinensis
orange1.1g031973m.g
I
0.417
orange1.1g031906m.g
Citrus sinensis
orange1.1g031906m.g
I
0.417
Ciclev10002782m.g
Citrus clementina
Ciclev10002782m.g
I
0.417
Cucsa.323100
Cucumis sativus
Cucsa.323100
I
0.417
cassava18624.valid.m1
Manihot esculenta
cassava18624.valid.m1
I
0.417
30170.m014386
Ricinus communis
30170.m014386
I
0.417
cassava18625.valid.m1
Manihot esculenta
cassava18625.valid.m1
I
0.417
cassava18626.valid.m1
Manihot esculenta
cassava18626.valid.m1
I
0.417
cassava35948.valid.m1
Manihot esculenta
cassava35948.valid.m1
I
0.417
cassava24859.valid.m1
Manihot esculenta
cassava24859.valid.m1
I
0.417
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.415