CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMAG_00757
(
Allomyces macrogynus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
AMAG_00757
T325985_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMAG_00757T0
Sox
31
99
PKRPMTAFFIFSGEFRDQVKAQNPGATVGTVAKILGERWRNMGEAEKAPYAIKVEQDKKRYETELAIYE
AMAG_00757T1
Sox
31
99
PKRPMTAFFIFSGEFRDQVKAQNPGATVGTVAKILGERWRNMGEAEKAPYAIKVEQDKKRYETELAIYE
Links
Other
Sox
family TFs
Other
Allomyces macrogynus
TFs
237 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAG_02260
Allomyces macrogynus
AMAG_02260
N
0.741
30131.m007272
Ricinus communis
30131.m007272
I
0.530
Cla009222
Citrullus lanatus
Cla009222
I
0.501
Cucsa.300030
Cucumis sativus
Cucsa.300030
I
0.501
Bo2g160920
Brassica oleracea
Bo2g160920
I
0.495
Bo9g014140
Brassica oleracea
Bo9g014140
I
0.495
Bra026498
Brassica rapa
Bra026498
I
0.495
Bra029371
Brassica rapa
Bra029371
I
0.495
Bostr.10199s0131
Boechera stricta
Bostr.10199s0131
N
0.495
Cagra.0086s0060
Capsella grandiflora
Cagra.0086s0060
I
0.495
Carubv10001858m.g
Capsella rubella
Carubv10001858m.g
I
0.495
HMGB6
Vitis vinifera
VIT_10s0071g00870
I
0.493
AMTR_s00171p00070550
Amborella trichopoda
AMTR_s00171p00070550
I
0.491
AAEL011425
Aedes aegypti
AAEL011425
I
0.489
Bm8632
Brugia malayi
Bm8632
N
0.488
LOAG_08062
Loa loa
LOAG_08062
N
0.488
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.488
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.488
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.488
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.488
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.488
tetur02g08250
Tetranychus urticae
tetur02g08250
N
0.487
estExt_fgenesh1_pm.C_880025
Physcomitrella patens
estExt_fgenesh1_pm.C_880025
I
0.486
cgd2_2120
Cryptosporidium parvum
cgd2_2120
N
0.477
Chro.20230
Cryptosporidium hominis
Chro.20230
N
0.477
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.477
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
0.476
gw1.106.59.1
Physcomitrella patens
gw1.106.59.1
I
0.476
gw1.106.60.1
Physcomitrella patens
gw1.106.60.1
I
0.476
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.475
PGSC0003DMG400025304
Solanum tuberosum
PGSC0003DMG400025304
I
0.472
PRUPE_ppa026912mg
Prunus persica
PRUPE_ppa026912mg
I
0.472
TCM_007659
Theobroma cacao
TCM_007659
I
0.472
Pm006054
Prunus mume
Pm006054
I
0.472
MDP0000205665
Malus domestica
MDP0000205665
I
0.472
Thhalv10004817m.g
Eutrema salsugineum
Thhalv10004817m.g
N
0.470
EVEC_0000079801
Enterobius vermicularis
EVEC_0000079801
N
0.469
GI18750
Drosophila mojavensis
FBgn0141489
N
0.466
CMU_036990
Cryptosporidium muris
CMU_036990
N
0.465
SapurV1A.0766s0120
Salix purpurea
SapurV1A.0766s0120
I
0.465
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.464
ENSMMUG00000031258
Macaca mulatta
ENSMMUG00000031258
I
0.462
GB54571
Apis mellifera
GB54571
N
0.458
L798_13679
Zootermopsis nevadensis
L798_13679
N
0.458
Cflo_11824--XP_001120264.1_APIME
Camponotus floridanus
Cflo_11824--XP_001120264.1_APIME
N
0.458
Hsal_00538--XP_001120264.1_APIME
Harpegnathos saltator
Hsal_00538--XP_001120264.1_APIME
N
0.458
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.457
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.457
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.457
L893_g29974
Steinernema glaseri
L893_g29974
N
0.457
L898_g4830
Steinernema monticolum
L898_g4830
N
0.457
Gorai.008G147700
Gossypium raimondii
Gorai.008G147700
I
0.456
BGIOSGA002908
Oryza indica
BGIOSGA002908
N
0.455
ENSCJAG00000005187
Callithrix jacchus
ENSCJAG00000005187
I
0.455
GRMZM2G032252
Zea mays
GRMZM2G032252
N
0.455
LPERR01G05200
Leersia perrieri
LPERR01G05200
N
0.455
OB01G15440
Oryza brachyantha
OB01G15440
N
0.455
OBART01G05540
Oryza barthii
OBART01G05540
N
0.455
OGLUM01G06010
Oryza glumaepatula
OGLUM01G06010
N
0.455
OLONG_023518
Oryza longistaminata
OLONG_023518
N
0.455
OMERI01G05760
Oryza meridionalis
OMERI01G05760
N
0.455
ONIVA01G06280
Oryza nivara
ONIVA01G06280
N
0.455
OPUNC01G05380
Oryza punctata
OPUNC01G05380
N
0.455
OPUNC02G20230
Oryza punctata
OPUNC02G20230
N
0.455
ORGLA01G0051500
Oryza glaberrima
ORGLA01G0051500
N
0.455
ORUFI01G05970
Oryza rufipogon
ORUFI01G05970
N
0.455
SSRP1-A
Oryza sativa
OS01G0184900
N
0.455
Sb03g003450
Sorghum bicolor
Sb03g003450
N
0.455
Si000646m.g
Setaria italica
Si000646m.g
N
0.455
cassava1392.valid.m1
Manihot esculenta
cassava1392.valid.m1
I
0.455
Pavir.Ea00282
Panicum virgatum
Pavir.Ea00282
N
0.455
Pavir.J08546
Panicum virgatum
Pavir.J08546
N
0.455
ASU_05994
Ascaris suum
ASU_05994
N
0.455
L889_g9094
Steinernema feltiae
L889_g9094
N
0.455
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.455
CJA04355
Caenorhabditis japonica
CJA04355
N
0.453
GLYMA10G43440
Glycine max
GLYMA10G43440
I
0.453
GLYMA20G23370
Glycine max
GLYMA20G23370
I
0.453
ENSOGAG00000026034
Otolemur garnettii
ENSOGAG00000026034
I
0.452
fgenesh1_pg.4_#_114
Coccomyxa subellipsoidea C169
fgenesh1_pg.4_#_114
N
0.452
fgeneshCV_pg.C_scaffold_4000123
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_4000123
N
0.452
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.452
SNAPOd2T00000181001
Oikopleura dioica
SNAPOd2T00000181001
N
0.451
MLOC_6673
Hordeum vulgare
MLOC_6673
N
0.450
L889_g16198
Steinernema feltiae
L889_g16198
N
0.450
L893_g23503
Steinernema glaseri
L893_g23503
N
0.450
L898_g7743
Steinernema monticolum
L898_g7743
N
0.450
MTR_1g115220
Medicago truncatula
MTR_1g115220
I
0.449
cassava23716.valid.m1
Manihot esculenta
cassava23716.valid.m1
I
0.449
Lus10035511.g
Linum usitatissimum
Lus10035511.g
I
0.449
CRE11852
Caenorhabditis remanei
CRE11852
N
0.448
BGIBMGA005288
Bombyx mori
BGIBMGA005288
N
0.447
HMEL015307
Heliconius melpomene
HMEL015307
N
0.447
Ciclev10012868m.g
Citrus clementina
Ciclev10012868m.g
I
0.447
orange1.1g030283m.g
Citrus sinensis
orange1.1g030283m.g
I
0.447
chr5.CM0180.220.nd
Lotus japonicus
chr5.CM0180.220.nd
I
0.447
Ppa-hmg-1.1
Pristionchus pacificus
PPA22767
N
0.446
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.446
scaffold113-EXSNAP2012.49
Pristionchus exspectatus
scaffold113-EXSNAP2012.49
N
0.446
scaffold1425-EXSNAP2012.3
Pristionchus exspectatus
scaffold1425-EXSNAP2012.3
N
0.446
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.445
ASIM_0001178701
Anisakis simplex
ASIM_0001178701
N
0.445
GSMUA_Achr11G07320_001
Musa acuminata
GSMUA_Achr11G07320_001
I
0.443
GSMUA_AchrUn_randomG22010_001
Musa acuminata
GSMUA_AchrUn_randomG22010_001
I
0.443
TCM_042534
Theobroma cacao
TCM_042534
I
0.441
29701.m000600
Ricinus communis
29701.m000600
I
0.440
ALUE_0000365901
Ascaris lumbricoides
ALUE_0000365901
N
0.440
ASU_09087
Ascaris suum
ASU_09087
N
0.440
SMUV_0000499601
Syphacia muris
SMUV_0000499601
N
0.440
GH21151
Drosophila grimshawi
FBgn0128613
N
0.439
GLYMA01G28820
Glycine max
GLYMA01G28820
I
0.439
OSTLU_15773
Ostreococcus lucimarinus
OSTLU_15773
N
0.439
TC012866
Tribolium castaneum
TC012866
N
0.439
RSKR_0000587700
Rhabditophanes kr3021
RSKR_0000587700
N
0.439
PPA14042
Pristionchus pacificus
PPA14042
N
0.438
AMTR_s00046p00227790
Amborella trichopoda
AMTR_s00046p00227790
N
0.435
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.434
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.434
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.434
TCNE_0000332201
Toxocara canis
TCNE_0000332201
N
0.434
AABR07009373.1
Rattus norvegicus
ENSRNOG00000011429
I
0.433
Ssrp
Drosophila melanogaster
FBgn0010278
N
0.433
GF12460
Drosophila ananassae
FBgn0089497
N
0.433
GG19998
Drosophila erecta
FBgn0112197
N
0.433
GD25013
Drosophila simulans
FBgn0196325
N
0.433
GJ21774
Drosophila virilis
FBgn0208892
N
0.433
GE11532
Drosophila yakuba
FBgn0229332
N
0.433
GSMUA_Achr10G07270_001
Musa acuminata
GSMUA_Achr10G07270_001
I
0.433
GSMUA_Achr2G03630_001
Musa acuminata
GSMUA_Achr2G03630_001
I
0.433
GSMUA_Achr9G21200_001
Musa acuminata
GSMUA_Achr9G21200_001
I
0.433
e_gw1.6.1001.1
Ostreococcus RCC809
e_gw1.6.1001.1
N
0.433
MDOA007633
Musca domestica
MDOA007633
N
0.433
HCOI01912600
Haemonchus contortus
HCOI01912600
I
0.433
HCOI01913300
Haemonchus contortus
HCOI01913300
I
0.433
NECAME_17555
Necator americanus
NECAME_17555
N
0.433
NECAME_17981
Necator americanus
NECAME_17981
N
0.433
F775_28104
Aegilops tauschii
F775_28104
N
0.432
Traes_3AS_AAAAD30B5
Triticum aestivum
Traes_3AS_AAAAD30B5
N
0.432
TRAES3BF096800150CFD_g
Triticum aestivum
TRAES3BF096800150CFD_g
N
0.432
TRIUR3_14091
Triticum urartu
TRIUR3_14091
N
0.432
Ciclev10016587m.g
Citrus clementina
Ciclev10016587m.g
N
0.430
orange1.1g026850m.g
Citrus sinensis
orange1.1g026850m.g
N
0.430
SNAPOd2T00016002001
Oikopleura dioica
SNAPOd2T00016002001
N
0.430
BGIOSGA027814
Oryza indica
BGIOSGA027814
I
0.429
BGIOSGA027819
Oryza indica
BGIOSGA027819
I
0.429
ENSOGAG00000031524
Otolemur garnettii
ENSOGAG00000031524
I
0.429
GK22092
Drosophila willistoni
FBgn0224077
N
0.429
OBART08G00070
Oryza barthii
OBART08G00070
I
0.429
OGLUM08G00090
Oryza glumaepatula
OGLUM08G00090
I
0.429
OLONG_014445
Oryza longistaminata
OLONG_014445
I
0.429
ONIVA08G00070
Oryza nivara
ONIVA08G00070
I
0.429
OPUNC08G00150
Oryza punctata
OPUNC08G00150
I
0.429
ORUFI08G00080
Oryza rufipogon
ORUFI08G00080
I
0.429
OS08G0101100
Oryza sativa
OS08G0101100
I
0.429
CRE03995
Caenorhabditis remanei
CRE03995
N
0.428
KGM_13851
Danaus plexippus
KGM_13851
N
0.428
HMGB6
Populus trichocarpa
POPTR_0007s15320
I
0.428
BRADI1G29730
Brachypodium distachyon
BRADI1G29730
I
0.427
F775_27510
Aegilops tauschii
F775_27510
I
0.427
GRMZM5G834758
Zea mays
GRMZM5G834758
I
0.427
LPERR06G23570
Leersia perrieri
LPERR06G23570
I
0.427
MLOC_78556
Hordeum vulgare
MLOC_78556
I
0.427
OB06G35870
Oryza brachyantha
OB06G35870
I
0.427
OBART06G28090
Oryza barthii
OBART06G28090
I
0.427
OGLUM06G29480
Oryza glumaepatula
OGLUM06G29480
I
0.427
OLONG_007465
Oryza longistaminata
OLONG_007465
I
0.427
OMERI06G28030
Oryza meridionalis
OMERI06G28030
I
0.427
ONIVA06G31070
Oryza nivara
ONIVA06G31070
I
0.427
OPUNC06G25640
Oryza punctata
OPUNC06G25640
I
0.427
ORGLA06G0238300
Oryza glaberrima
ORGLA06G0238300
I
0.427
ORUFI06G30030
Oryza rufipogon
ORUFI06G30030
I
0.427
OS06G0728000
Oryza sativa
OS06G0728000
I
0.427
Sb10g030910
Sorghum bicolor
Sb10g030910
I
0.427
Si007288m.g
Setaria italica
Si007288m.g
I
0.427
TRIUR3_13577
Triticum urartu
TRIUR3_13577
I
0.427
Pavir.Db00040
Panicum virgatum
Pavir.Db00040
I
0.427
Pavir.J04920
Panicum virgatum
Pavir.J04920
I
0.427
GB47837
Apis mellifera
GB47837
N
0.426
SINV22588
Solenopsis invicta
SINV22588
N
0.426
Cflo_05893--XP_624266.1_APIME
Camponotus floridanus
Cflo_05893--XP_624266.1_APIME
N
0.426
Hsal_13112--XP_624266.1_APIME
Harpegnathos saltator
Hsal_13112--XP_624266.1_APIME
N
0.426
Eucgr.J00336
Eucalyptus grandis
Eucgr.J00336
I
0.425
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.425
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.425
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.424
SELMODRAFT_175895
Selaginella moellendorffii
SELMODRAFT_175895
I
0.423
SELMODRAFT_38818
Selaginella moellendorffii
SELMODRAFT_38818
I
0.423
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.422
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.422
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.422
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.422
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.422
MBM_02410
Marssonina brunnea
MBM_02410
I
0.422
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.422
Solyc04g008820.2
Solanum lycopersicum
Solyc04g008820.2
I
0.422
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.422
Lus10018073.g
Linum usitatissimum
Lus10018073.g
N
0.422
Lus10042065.g
Linum usitatissimum
Lus10042065.g
N
0.422
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.421
evm.TU.supercontig_247.1
Carica papaya
evm.TU.supercontig_247.1
N
0.420
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.419
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.419
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.419
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.419
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.419
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.419
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.419
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.419
MTR_5g082570
Medicago truncatula
MTR_5g082570
I
0.418
OSTLU_31946
Ostreococcus lucimarinus
OSTLU_31946
I
0.418
Si014434m.g
Setaria italica
Si014434m.g
N
0.418
Lus10028298.g
Linum usitatissimum
Lus10028298.g
I
0.418
Lus10040192.g
Linum usitatissimum
Lus10040192.g
I
0.418
HMGB2
Ochotona princeps
ENSOPRG00000010124
I
0.417
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.416
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.416
NECAME_16525
Necator americanus
NECAME_16525
N
0.416
BGIOSGA019295
Oryza indica
BGIOSGA019295
N
0.415
BRADI2G33580
Brachypodium distachyon
BRADI2G33580
N
0.415
F775_29723
Aegilops tauschii
F775_29723
I
0.415
LPERR05G04880
Leersia perrieri
LPERR05G04880
N
0.415
MLOC_27773
Hordeum vulgare
MLOC_27773
I
0.415
OB05G15230
Oryza brachyantha
OB05G15230
N
0.415
OBART05G05520
Oryza barthii
OBART05G05520
N
0.415
OGLUM05G05400
Oryza glumaepatula
OGLUM05G05400
N
0.415
OLONG_012679
Oryza longistaminata
OLONG_012679
N
0.415
OMERI05G05210
Oryza meridionalis
OMERI05G05210
N
0.415
ONIVA05G05990
Oryza nivara
ONIVA05G05990
N
0.415
OPUNC05G05150
Oryza punctata
OPUNC05G05150
N
0.415
ORGLA05G0049600
Oryza glaberrima
ORGLA05G0049600
N
0.415
ORUFI05G05850
Oryza rufipogon
ORUFI05G05850
N
0.415
SSRP1-B
Oryza sativa
OS05G0182600
N
0.415
Traes_1AS_3FCB35E65
Triticum aestivum
Traes_1AS_3FCB35E65
I
0.415
Traes_1BS_15F9D276D
Triticum aestivum
Traes_1BS_15F9D276D
I
0.415
Traes_1DS_C7F1E9F38
Triticum aestivum
Traes_1DS_C7F1E9F38
I
0.415
Ca_19340
Cicer arietinum
Ca_19340
I
0.415