CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000499601
(
Syphacia muris
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SMUV_0000499601
T336962_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000499601-mRNA-1
Sox
19
83
PKRAMPAFFLWMQENRERLKKPGMGVADVAKAAGIEWGKLADKSKWEKMAEEEKKRYERDMAAYK
Links
Other
Sox
family TFs
Other
Syphacia muris
TFs
166 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EVEC_0000079801
Enterobius vermicularis
EVEC_0000079801
N
0.683
Ppa-hmg-1.1
Pristionchus pacificus
PPA22767
N
0.645
scaffold113-EXSNAP2012.49
Pristionchus exspectatus
scaffold113-EXSNAP2012.49
N
0.645
scaffold1425-EXSNAP2012.3
Pristionchus exspectatus
scaffold1425-EXSNAP2012.3
N
0.645
ASIM_0001178701
Anisakis simplex
ASIM_0001178701
N
0.642
ASU_05994
Ascaris suum
ASU_05994
N
0.640
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.640
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.632
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.632
L889_g9094
Steinernema feltiae
L889_g9094
N
0.631
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.630
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.629
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.629
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.629
L893_g29974
Steinernema glaseri
L893_g29974
N
0.629
L898_g4830
Steinernema monticolum
L898_g4830
N
0.629
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.622
TCNE_0000332201
Toxocara canis
TCNE_0000332201
N
0.619
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.617
CJA04355
Caenorhabditis japonica
CJA04355
N
0.615
CRE11852
Caenorhabditis remanei
CRE11852
N
0.615
ALUE_0000365901
Ascaris lumbricoides
ALUE_0000365901
N
0.613
ASU_09087
Ascaris suum
ASU_09087
N
0.613
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.608
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.608
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.608
L893_g23503
Steinernema glaseri
L893_g23503
N
0.605
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.602
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.602
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.602
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.602
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.602
L889_g16198
Steinernema feltiae
L889_g16198
N
0.602
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.602
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.602
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.602
L898_g7743
Steinernema monticolum
L898_g7743
N
0.599
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.596
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.596
NECAME_17555
Necator americanus
NECAME_17555
N
0.596
NECAME_17981
Necator americanus
NECAME_17981
N
0.596
Bm8632
Brugia malayi
Bm8632
N
0.577
LOAG_08062
Loa loa
LOAG_08062
N
0.577
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.577
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.577
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.577
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.577
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.577
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
0.573
L889_g6592
Steinernema feltiae
L889_g6592
N
0.565
PTRK_0001161700
Parastrongyloides trichosuri
PTRK_0001161700
N
0.558
SPAL_0001085700
Strongyloides papillosus
SPAL_0001085700
N
0.558
SSTP_0000585600
Strongyloides stercoralis
SSTP_0000585600
N
0.558
SVE_0954900
Strongyloides venezuelensis
SVE_0954900
N
0.558
RSKR_0000587700
Rhabditophanes kr3021
RSKR_0000587700
N
0.549
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.548
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.548
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.548
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.548
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.548
ASIM_0001147101
Anisakis simplex
ASIM_0001147101
N
0.542
PPA06513
Pristionchus pacificus
PPA06513
N
0.533
scaffold98-EXSNAP2012.51
Pristionchus exspectatus
scaffold98-EXSNAP2012.51
N
0.533
GK22092
Drosophila willistoni
FBgn0224077
N
0.530
PPA02261
Pristionchus pacificus
PPA02261
N
0.530
scaffold164-EXSNAP2012.19
Pristionchus exspectatus
scaffold164-EXSNAP2012.19
N
0.530
GI18750
Drosophila mojavensis
FBgn0141489
N
0.524
PPA14042
Pristionchus pacificus
PPA14042
N
0.524
ANCCAN_08230
Ancylostoma caninum
ANCCAN_08230
I
0.520
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.517
tetur02g08250
Tetranychus urticae
tetur02g08250
N
0.515
RSKR_0000746900
Rhabditophanes kr3021
RSKR_0000746900
N
0.511
RSKR_0000128800
Rhabditophanes kr3021
RSKR_0000128800
N
0.506
ANCDUO_26276
Ancylostoma duodenale
ANCDUO_26276
N
0.504
Ssrp
Drosophila melanogaster
FBgn0010278
N
0.502
GF12460
Drosophila ananassae
FBgn0089497
N
0.502
GG19998
Drosophila erecta
FBgn0112197
N
0.502
GD25013
Drosophila simulans
FBgn0196325
N
0.502
GJ21774
Drosophila virilis
FBgn0208892
N
0.502
GE11532
Drosophila yakuba
FBgn0229332
N
0.502
MDOA007633
Musca domestica
MDOA007633
N
0.502
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.500
CRE03995
Caenorhabditis remanei
CRE03995
N
0.499
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.498
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.498
NECAME_16525
Necator americanus
NECAME_16525
N
0.498
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.498
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.497
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.496
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.495
GH21151
Drosophila grimshawi
FBgn0128613
N
0.495
GL11071
Drosophila persimilis
FBgn0148681
N
0.495
ANCCAN_04253
Ancylostoma caninum
ANCCAN_04253
N
0.492
PTRK_0000111400
Parastrongyloides trichosuri
PTRK_0000111400
N
0.492
ANCCAN_21637
Ancylostoma caninum
ANCCAN_21637
N
0.485
ANCCEY_10464
Ancylostoma ceylanicum
ANCCEY_10464
N
0.485
ANCDUO_11855
Ancylostoma duodenale
ANCDUO_11855
N
0.485
HCOI00417600
Haemonchus contortus
HCOI00417600
N
0.485
HPLM_0000803901
Haemonchus placei
HPLM_0000803901
N
0.485
NBR_0001132501
Nippostrongylus brasiliensis
NBR_0001132501
N
0.485
NECAME_10840
Necator americanus
NECAME_10840
N
0.485
SPAL_0001421900
Strongyloides papillosus
SPAL_0001421900
N
0.485
SVE_0536900
Strongyloides venezuelensis
SVE_0536900
N
0.485
TELCIR_05217
Teladorsagia circumcincta
TELCIR_05217
N
0.485
TELCIR_22690
Teladorsagia circumcincta
TELCIR_22690
N
0.485
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.484
L889_g29516
Steinernema feltiae
L889_g29516
N
0.481
Minc03634
Meloidogyne incognita
Minc03634
N
0.480
Minc04648
Meloidogyne incognita
Minc04648
N
0.480
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
0.480
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.480
HPBE_0002310801
Heligmosomoides bakeri
HPBE_0002310801
N
0.479
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.479
TsM_000111500
Taenia solium
TsM_000111500
N
0.479
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
0.479
BGIBMGA005288
Bombyx mori
BGIBMGA005288
N
0.478
HMEL015307
Heliconius melpomene
HMEL015307
N
0.478
SSTP_0000790100
Strongyloides stercoralis
SSTP_0000790100
N
0.473
Minc01744
Meloidogyne incognita
Minc01744
N
0.472
Minc10016
Meloidogyne incognita
Minc10016
N
0.472
DICVIV_01337
Dictyocaulus viviparus
DICVIV_01337
N
0.472
RSKR_0000269200
Rhabditophanes kr3021
RSKR_0000269200
N
0.472
RSKR_0000269500
Rhabditophanes kr3021
RSKR_0000269500
N
0.472
SVUK_0001398701
Strongylus vulgaris
SVUK_0001398701
N
0.472
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.468
HCOI01420700
Haemonchus contortus
HCOI01420700
N
0.467
HCOI02106600
Haemonchus contortus
HCOI02106600
N
0.467
MhA1_Contig128.frz3.gene5
Meloidogyne hapla
MhA1_Contig128.frz3.gene5
N
0.466
MhA1_Contig2971.frz3.fgene1
Meloidogyne hapla
MhA1_Contig2971.frz3.fgene1
N
0.466
CBG20663
Caenorhabditis briggsae
CBG20663
N
0.464
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.462
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.462
ACAC_0000857301
Angiostrongylus cantonensis
ACAC_0000857301
N
0.462
ACOC_0000653601
Angiostrongylus costaricensis
ACOC_0000653601
N
0.462
hmg-4
Caenorhabditis elegans
WBGene00001974
N
0.460
KGM_13851
Danaus plexippus
KGM_13851
N
0.459
SMAR015352
Strigamia maritima
SMAR015352
N
0.456
CBG09136
Caenorhabditis briggsae
CBG09136
N
0.454
LCUP005047
Lucilia cuprina
LCUP005047
N
0.451
AAEL011425
Aedes aegypti
AAEL011425
I
0.450
ECANG7_00770
Echinococcus canadensis
ECANG7_00770
N
0.449
EmuJ_000894800
Echinococcus multilocularis
EmuJ_000894800
N
0.449
ALUE_0000605501
Ascaris lumbricoides
ALUE_0000605501
N
0.448
ASU_07820
Ascaris suum
ASU_07820
N
0.448
CapteG172235
Capitella teleta
CapteG172235
I
0.447
L889_g30211
Steinernema feltiae
L889_g30211
N
0.447
AMAG_00757
Allomyces macrogynus
AMAG_00757
N
0.440
AMAG_02260
Allomyces macrogynus
AMAG_02260
N
0.440
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
0.433
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.432
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.432
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.429
Cflo_11824--XP_001120264.1_APIME
Camponotus floridanus
Cflo_11824--XP_001120264.1_APIME
N
0.429
Hsal_00538--XP_001120264.1_APIME
Harpegnathos saltator
Hsal_00538--XP_001120264.1_APIME
N
0.429
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.425
OSTLU_31946
Ostreococcus lucimarinus
OSTLU_31946
I
0.424
L596_g8199
Steinernema carpocapsae
L596_g8199
N
0.424
L892_g2503
Steinernema scapterisci
L892_g2503
N
0.424
GB47837
Apis mellifera
GB47837
N
0.423
SINV22588
Solenopsis invicta
SINV22588
N
0.423
Cflo_05893--XP_624266.1_APIME
Camponotus floridanus
Cflo_05893--XP_624266.1_APIME
N
0.423
Hsal_13112--XP_624266.1_APIME
Harpegnathos saltator
Hsal_13112--XP_624266.1_APIME
N
0.423
ALUE_0001190701
Ascaris lumbricoides
ALUE_0001190701
N
0.422
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.422
TCNE_0000520101
Toxocara canis
TCNE_0000520101
N
0.422
nDi.2.2.2.g04713
Dirofilaria immitis
nDi.2.2.2.g04713
N
0.419