CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RSKR_0000746900
(
Rhabditophanes kr3021
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
RSKR_0000746900
T336873_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RSKR_0000746900.1
Sox
31
95
PKRAKSAYMIWLAEHRAELTKPGLNVCDVARLAGAAWNKLTDKVRWEELAAEDKKRYEREIAIYK
Links
Other
Sox
family TFs
Other
Rhabditophanes kr3021
TFs
194 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PPA06513
Pristionchus pacificus
PPA06513
N
0.639
scaffold98-EXSNAP2012.51
Pristionchus exspectatus
scaffold98-EXSNAP2012.51
N
0.639
RSKR_0000269200
Rhabditophanes kr3021
RSKR_0000269200
N
0.638
PTRK_0001161700
Parastrongyloides trichosuri
PTRK_0001161700
N
0.624
SPAL_0001085700
Strongyloides papillosus
SPAL_0001085700
N
0.624
SSTP_0000585600
Strongyloides stercoralis
SSTP_0000585600
N
0.624
SVE_0954900
Strongyloides venezuelensis
SVE_0954900
N
0.624
RSKR_0000128800
Rhabditophanes kr3021
RSKR_0000128800
N
0.619
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.615
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.615
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.615
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.615
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.615
L889_g29516
Steinernema feltiae
L889_g29516
N
0.599
ANCCAN_08230
Ancylostoma caninum
ANCCAN_08230
I
0.597
RSKR_0000269500
Rhabditophanes kr3021
RSKR_0000269500
N
0.587
Bm8632
Brugia malayi
Bm8632
N
0.582
LOAG_08062
Loa loa
LOAG_08062
N
0.582
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.582
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.582
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.582
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.582
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.582
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.575
ANCDUO_26276
Ancylostoma duodenale
ANCDUO_26276
N
0.572
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.572
ASIM_0001178701
Anisakis simplex
ASIM_0001178701
N
0.567
ANCCAN_04253
Ancylostoma caninum
ANCCAN_04253
N
0.559
ASU_05994
Ascaris suum
ASU_05994
N
0.558
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.558
CRE11852
Caenorhabditis remanei
CRE11852
N
0.557
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.555
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.553
HPBE_0002310801
Heligmosomoides bakeri
HPBE_0002310801
N
0.553
L889_g16198
Steinernema feltiae
L889_g16198
N
0.553
L898_g7743
Steinernema monticolum
L898_g7743
N
0.553
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.553
Ppa-hmg-1.1
Pristionchus pacificus
PPA22767
N
0.552
scaffold113-EXSNAP2012.49
Pristionchus exspectatus
scaffold113-EXSNAP2012.49
N
0.552
scaffold1425-EXSNAP2012.3
Pristionchus exspectatus
scaffold1425-EXSNAP2012.3
N
0.552
CJA04355
Caenorhabditis japonica
CJA04355
N
0.551
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.547
L893_g23503
Steinernema glaseri
L893_g23503
N
0.547
NECAME_16525
Necator americanus
NECAME_16525
N
0.547
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.547
Minc03634
Meloidogyne incognita
Minc03634
N
0.546
Minc04648
Meloidogyne incognita
Minc04648
N
0.546
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
0.546
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.546
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.545
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.545
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.545
L893_g29974
Steinernema glaseri
L893_g29974
N
0.545
L898_g4830
Steinernema monticolum
L898_g4830
N
0.545
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.543
L889_g9094
Steinernema feltiae
L889_g9094
N
0.543
EVEC_0000079801
Enterobius vermicularis
EVEC_0000079801
N
0.541
SVUK_0001398701
Strongylus vulgaris
SVUK_0001398701
N
0.534
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.528
ALUE_0000448701
Ascaris lumbricoides
ALUE_0000448701
N
0.528
ASU_05752
Ascaris suum
ASU_05752
N
0.528
ALUE_0000605501
Ascaris lumbricoides
ALUE_0000605501
N
0.527
ASU_07820
Ascaris suum
ASU_07820
N
0.527
HCOI00417600
Haemonchus contortus
HCOI00417600
N
0.527
HPLM_0000803901
Haemonchus placei
HPLM_0000803901
N
0.527
TELCIR_05217
Teladorsagia circumcincta
TELCIR_05217
N
0.527
TELCIR_22690
Teladorsagia circumcincta
TELCIR_22690
N
0.527
ALUE_0000365901
Ascaris lumbricoides
ALUE_0000365901
N
0.524
ASU_09087
Ascaris suum
ASU_09087
N
0.524
TCNE_0000332201
Toxocara canis
TCNE_0000332201
N
0.524
HCOI01420700
Haemonchus contortus
HCOI01420700
N
0.522
HCOI02106600
Haemonchus contortus
HCOI02106600
N
0.522
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.522
ANCCAN_21637
Ancylostoma caninum
ANCCAN_21637
N
0.521
ANCCEY_10464
Ancylostoma ceylanicum
ANCCEY_10464
N
0.521
ANCDUO_11855
Ancylostoma duodenale
ANCDUO_11855
N
0.521
DICVIV_01337
Dictyocaulus viviparus
DICVIV_01337
N
0.521
NBR_0001132501
Nippostrongylus brasiliensis
NBR_0001132501
N
0.521
NECAME_10840
Necator americanus
NECAME_10840
N
0.521
ACAC_0000857301
Angiostrongylus cantonensis
ACAC_0000857301
N
0.516
ACOC_0000653601
Angiostrongylus costaricensis
ACOC_0000653601
N
0.516
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.515
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.515
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.515
L596_g8199
Steinernema carpocapsae
L596_g8199
N
0.514
L892_g2503
Steinernema scapterisci
L892_g2503
N
0.514
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.513
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.512
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.512
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.512
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.512
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.512
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.512
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.512
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.512
NECAME_17555
Necator americanus
NECAME_17555
N
0.512
NECAME_17981
Necator americanus
NECAME_17981
N
0.512
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.512
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.512
SMUV_0000499601
Syphacia muris
SMUV_0000499601
N
0.511
ASIM_0000156001
Anisakis simplex
ASIM_0000156001
N
0.503
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.501
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.495
CBG09136
Caenorhabditis briggsae
CBG09136
N
0.489
hmg-4
Caenorhabditis elegans
WBGene00001974
N
0.489
nLs.2.1.2.g02941
Litomosoides sigmodontis
nLs.2.1.2.g02941
N
0.489
EVEC_0000171701
Enterobius vermicularis
EVEC_0000171701
N
0.487
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
0.487
CRE03995
Caenorhabditis remanei
CRE03995
N
0.478
RSKR_0000587700
Rhabditophanes kr3021
RSKR_0000587700
N
0.478
Bm6643
Brugia malayi
Bm6643
N
0.476
L898_g23313
Steinernema monticolum
L898_g23313
N
0.476
nDi.2.2.2.g04713
Dirofilaria immitis
nDi.2.2.2.g04713
N
0.476
Smp_148930
Schistosoma mansoni
Smp_148930
N
0.473
Sjc_0035580
Schistosoma japonicum
Sjc_0035580
N
0.473
A_01848
Schistosoma haematobium
A_01848
N
0.473
SCUD_0000070901
Schistosoma curassoni
SCUD_0000070901
N
0.473
SMTD_0001155301
Schistosoma mattheei
SMTD_0001155301
N
0.473
OSTLU_31946
Ostreococcus lucimarinus
OSTLU_31946
I
0.472
ECPE_0001309901
Echinostoma caproni
ECPE_0001309901
N
0.472
PPA02261
Pristionchus pacificus
PPA02261
N
0.470
ECANG7_00770
Echinococcus canadensis
ECANG7_00770
N
0.470
EmuJ_000894800
Echinococcus multilocularis
EmuJ_000894800
N
0.470
scaffold164-EXSNAP2012.19
Pristionchus exspectatus
scaffold164-EXSNAP2012.19
N
0.470
Bm2524
Brugia malayi
Bm2524
N
0.464
tetur02g08250
Tetranychus urticae
tetur02g08250
N
0.459
GPUH_0000029001
Gongylonema pulchrum
GPUH_0000029001
N
0.459
HPBE_0001796801
Heligmosomoides bakeri
HPBE_0001796801
N
0.459
WUBG_03677
Wuchereria bancrofti
WUBG_03677
N
0.458
LOAG_04347
Loa loa
LOAG_04347
N
0.458
WBGene00244511
Onchocerca volvulus
WBGene00244511
N
0.458
EEL_0000829801
Elaeophora elaphi
EEL_0000829801
N
0.458
GPUH_0001272801
Gongylonema pulchrum
GPUH_0001272801
N
0.458
GPUH_0001539601
Gongylonema pulchrum
GPUH_0001539601
N
0.458
nAv.1.0.1.g03971
Acanthocheilonema viteae
nAv.1.0.1.g03971
N
0.458
nDi.2.2.2.g07477
Dirofilaria immitis
nDi.2.2.2.g07477
N
0.458
nLs.2.1.2.g07238
Litomosoides sigmodontis
nLs.2.1.2.g07238
N
0.458
nOo.2.0.1.g02324
Onchocerca ochengi
nOo.2.0.1.g02324
N
0.458
OFLC_0000770701
Onchocerca flexuosa
OFLC_0000770701
N
0.458
TCLT_0000097001
Thelazia callipaeda
TCLT_0000097001
N
0.458
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
0.457
ANCDUO_24269
Ancylostoma duodenale
ANCDUO_24269
N
0.457
PTRK_0000111400
Parastrongyloides trichosuri
PTRK_0000111400
N
0.454
SPAL_0001421900
Strongyloides papillosus
SPAL_0001421900
N
0.454
SSTP_0000790100
Strongyloides stercoralis
SSTP_0000790100
N
0.454
SVE_0536900
Strongyloides venezuelensis
SVE_0536900
N
0.454
gw1.6.1665.1
Ostreococcus RCC809
gw1.6.1665.1
I
0.453
HNAJ_0000793101
Hymenolepis nana
HNAJ_0000793101
I
0.453
DME_0000590001
Dracunculus medinensis
DME_0000590001
N
0.448
CapteG172235
Capitella teleta
CapteG172235
I
0.446
ASIM_0001147101
Anisakis simplex
ASIM_0001147101
N
0.446
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.446
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.444
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.444
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.440
TsM_000111500
Taenia solium
TsM_000111500
N
0.440
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
0.440
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.438
L889_g6592
Steinernema feltiae
L889_g6592
N
0.437
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.435
GL17523
Drosophila persimilis
FBgn0155126
I
0.435
CJA19030
Caenorhabditis japonica
CJA19030
N
0.434
OSTLU_18991
Ostreococcus lucimarinus
OSTLU_18991
N
0.433
ETH_00031100
Eimeria tenella
ETH_00031100
I
0.432
GK22092
Drosophila willistoni
FBgn0224077
N
0.431
ANCCAN_19939
Ancylostoma caninum
ANCCAN_19939
N
0.430
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.429
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.427
HmgZ
Drosophila yakuba
FBgn0068145
I
0.427
GF11622
Drosophila ananassae
FBgn0088662
I
0.427
GG20749
Drosophila erecta
FBgn0112936
I
0.427
GH20784
Drosophila grimshawi
FBgn0128247
I
0.427
GI20867
Drosophila mojavensis
FBgn0143601
I
0.427
GM15692
Drosophila sechellia
FBgn0170608
I
0.427
GD25171
Drosophila simulans
FBgn0196483
I
0.427
GJ20604
Drosophila virilis
FBgn0207743
I
0.427
GK15658
Drosophila willistoni
FBgn0217663
I
0.427
PPA14042
Pristionchus pacificus
PPA14042
N
0.426
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.425
MBM_02410
Marssonina brunnea
MBM_02410
I
0.425
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.425
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.425
hmg-3
Caenorhabditis elegans
WBGene00001973
N
0.425
BXY_0253100
Bursaphelenchus xylophilus
BXY_0253100
N
0.425
L596_g20063
Steinernema carpocapsae
L596_g20063
N
0.424
SMUV_0000634201
Syphacia muris
SMUV_0000634201
N
0.423
nAv.1.0.1.g09805
Acanthocheilonema viteae
nAv.1.0.1.g09805
N
0.422
MDOA014797
Musca domestica
MDOA014797
I
0.421
PHUM125270
Pediculus humanus
PHUM125270
N
0.419
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.416
GL11071
Drosophila persimilis
FBgn0148681
N
0.416
GI18750
Drosophila mojavensis
FBgn0141489
N
0.415
ACAC_0000798501
Angiostrongylus cantonensis
ACAC_0000798501
N
0.415
ACOC_0001190001
Angiostrongylus costaricensis
ACOC_0001190001
N
0.415