Si024096m.g (Setaria italica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Si024096m.g T332550_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Si024096m Sox 565 633

Links

Other Sox family TFs
Other Setaria italica TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J10741 Panicum virgatum Pavir.J10741 N 0.723
GRMZM5G842484 Zea mays GRMZM5G842484 N 0.650
Sb09g005650 Sorghum bicolor Sb09g005650 N 0.650
Pavir.Ca01033 Panicum virgatum Pavir.Ca01033 N 0.643
Pavir.J20558 Panicum virgatum Pavir.J20558 N 0.643
Si021575m.g Setaria italica Si021575m.g N 0.638
BGIOSGA019295 Oryza indica BGIOSGA019295 N 0.602
LPERR05G04880 Leersia perrieri LPERR05G04880 N 0.602
OB05G15230 Oryza brachyantha OB05G15230 N 0.602
OBART05G05520 Oryza barthii OBART05G05520 N 0.602
OGLUM05G05400 Oryza glumaepatula OGLUM05G05400 N 0.602
OLONG_012679 Oryza longistaminata OLONG_012679 N 0.602
OMERI05G05210 Oryza meridionalis OMERI05G05210 N 0.602
ONIVA05G05990 Oryza nivara ONIVA05G05990 N 0.602
OPUNC05G05150 Oryza punctata OPUNC05G05150 N 0.602
ORGLA05G0049600 Oryza glaberrima ORGLA05G0049600 N 0.602
ORUFI05G05850 Oryza rufipogon ORUFI05G05850 N 0.602
SSRP1-B Oryza sativa OS05G0182600 N 0.602
BRADI2G33580 Brachypodium distachyon BRADI2G33580 N 0.595
F775_29723 Aegilops tauschii F775_29723 I 0.590
MLOC_27773 Hordeum vulgare MLOC_27773 I 0.590
Traes_1AS_3FCB35E65 Triticum aestivum Traes_1AS_3FCB35E65 I 0.590
Traes_1BS_15F9D276D Triticum aestivum Traes_1BS_15F9D276D I 0.590
Traes_1DS_C7F1E9F38 Triticum aestivum Traes_1DS_C7F1E9F38 I 0.590
LPERR01G05200 Leersia perrieri LPERR01G05200 N 0.589
OB01G15440 Oryza brachyantha OB01G15440 N 0.589
BGIOSGA002908 Oryza indica BGIOSGA002908 N 0.583
OBART01G05540 Oryza barthii OBART01G05540 N 0.583
OGLUM01G06010 Oryza glumaepatula OGLUM01G06010 N 0.583
OLONG_023518 Oryza longistaminata OLONG_023518 N 0.583
OMERI01G05760 Oryza meridionalis OMERI01G05760 N 0.583
ONIVA01G06280 Oryza nivara ONIVA01G06280 N 0.583
ORGLA01G0051500 Oryza glaberrima ORGLA01G0051500 N 0.583
ORUFI01G05970 Oryza rufipogon ORUFI01G05970 N 0.583
SSRP1-A Oryza sativa OS01G0184900 N 0.583
GRMZM2G032252 Zea mays GRMZM2G032252 N 0.581
Sb03g003450 Sorghum bicolor Sb03g003450 N 0.581
Si000646m.g Setaria italica Si000646m.g N 0.581
Pavir.Ea00282 Panicum virgatum Pavir.Ea00282 N 0.581
Pavir.J08546 Panicum virgatum Pavir.J08546 N 0.581
OPUNC01G05380 Oryza punctata OPUNC01G05380 N 0.532
OPUNC02G20230 Oryza punctata OPUNC02G20230 N 0.532
F775_28104 Aegilops tauschii F775_28104 N 0.529
Traes_3AS_AAAAD30B5 Triticum aestivum Traes_3AS_AAAAD30B5 N 0.529
TRAES3BF096800150CFD_g Triticum aestivum TRAES3BF096800150CFD_g N 0.529
TRIUR3_14091 Triticum urartu TRIUR3_14091 N 0.529
MLOC_6673 Hordeum vulgare MLOC_6673 N 0.510
mgf024995m Mimulus guttatus mgf024995m I 0.429
TRIATDRAFT_321166 Trichoderma atroviride TRIATDRAFT_321166 I 0.416