CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCJAG00000031139
(
Callithrix jacchus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSCJAG00000031139
T327743_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.472
0.362
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000044205
Sox
33
101
PKRLLSGFFLLCSEFHPKIKYTNPGISIGGVAKKLGEMWHKLNDSEKQPYVTKVAKLKEKYEKDVADYK
ENSCJAP00000048167
Sox
6
75
PKKPKGKMSAYDFLVQMCREEHKKKNPEVSVNLAEFSKKCSERWKTMSGKEKSKFDEMVVDKVHYHWEMK
ENSCJAP00000048167
Sox
94
162
PKRLLSGFFLLCSEFHPKIKYTNPGISIGGVAKKLGEMWHKLNDSEKQPYVTKVAKLKEKYEKDVADYK
Links
Other
Sox
family TFs
Other
Callithrix jacchus
TFs
235 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSMMUG00000031258
Macaca mulatta
ENSMMUG00000031258
I
0.676
ENSCJAG00000005187
Callithrix jacchus
ENSCJAG00000005187
I
0.674
ENSOGAG00000031524
Otolemur garnettii
ENSOGAG00000031524
I
0.607
HMGB2
Ochotona princeps
ENSOPRG00000010124
I
0.575
ENSGGOG00000026945
Gorilla gorilla
ENSGGOG00000026945
N
0.553
ENSMMUG00000010106
Macaca mulatta
ENSMMUG00000010106
I
0.551
ENSCSAG00000017502
Chlorocebus sabaeus
ENSCSAG00000017502
N
0.550
ENSPANG00000025478
Papio anubis
ENSPANG00000025478
N
0.543
ENSCJAG00000033322
Callithrix jacchus
ENSCJAG00000033322
N
0.542
ENSCSAG00000013078
Chlorocebus sabaeus
ENSCSAG00000013078
N
0.542
ENSMPUG00000018359
Mustela putorius furo
ENSMPUG00000018359
N
0.539
ENSSSCG00000020770
Sus scrofa
ENSSSCG00000020770
N
0.539
ENSSSCG00000024283
Sus scrofa
ENSSSCG00000024283
N
0.539
PPA02261
Pristionchus pacificus
PPA02261
N
0.539
scaffold164-EXSNAP2012.19
Pristionchus exspectatus
scaffold164-EXSNAP2012.19
N
0.539
ENSCJAG00000014214
Callithrix jacchus
ENSCJAG00000014214
N
0.537
ENSOGAG00000034481
Otolemur garnettii
ENSOGAG00000034481
N
0.536
LOC688583
Rattus norvegicus
ENSRNOG00000050910
N
0.536
ENSCSAG00000010707
Chlorocebus sabaeus
ENSCSAG00000010707
N
0.533
ENSPANG00000010595
Papio anubis
ENSPANG00000010595
N
0.532
ENSBTAG00000031711
Bos taurus
ENSBTAG00000031711
N
0.530
ENSMMUP00000037751
Macaca fascicularis
ENSMMUP00000037751
N
0.530
ENSOGAG00000034886
Otolemur garnettii
ENSOGAG00000034886
N
0.527
ENSCJAG00000007044
Callithrix jacchus
ENSCJAG00000007044
N
0.525
ENSCJAG00000007419
Callithrix jacchus
ENSCJAG00000007419
N
0.525
ENSPANG00000020000
Papio anubis
ENSPANG00000020000
N
0.523
HMGB3
Oryctolagus cuniculus
ENSOCUG00000024959
N
0.519
ENSMMUP00000003419
Macaca fascicularis
ENSMMUP00000003419
N
0.518
ENSPANG00000023341
Papio anubis
ENSPANG00000023341
N
0.516
ENSOGAG00000026034
Otolemur garnettii
ENSOGAG00000026034
I
0.514
ENSMMUG00000002541
Macaca mulatta
ENSMMUG00000002541
I
0.513
ENSOGAG00000031959
Otolemur garnettii
ENSOGAG00000031959
N
0.509
AABR07025074.1
Rattus norvegicus
ENSRNOG00000032550
N
0.509
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.507
ENSMPUG00000020113
Mustela putorius furo
ENSMPUG00000020113
N
0.502
AABR07009373.1
Rattus norvegicus
ENSRNOG00000011429
I
0.502
ENSBTAG00000005098
Bos taurus
ENSBTAG00000005098
N
0.500
ENSBTAP00000049034-D1
Bos grunniens
ENSBTAP00000049034-D1
N
0.500
ENSOCUG00000021132
Oryctolagus cuniculus
ENSOCUG00000021132
N
0.499
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.498
ENSMLUG00000028530
Myotis lucifugus
ENSMLUG00000028530
N
0.496
ENSCJAG00000004401
Callithrix jacchus
ENSCJAG00000004401
N
0.495
ENSOGAG00000007401
Otolemur garnettii
ENSOGAG00000007401
N
0.494
AAH44009
Xenopus laevis
AAH44009
N
0.494
ACEP16595
Atta cephalotes
ACEP16595
I
0.491
ENSCJAG00000014197
Callithrix jacchus
ENSCJAG00000014197
N
0.491
ENSSTOG00000012404
Ictidomys tridecemlineatus
ENSSTOG00000012404
N
0.490
ENSTBEG00000013604
Tupaia belangeri
ENSTBEG00000013604
N
0.489
hmgb1a
Tetraodon nigroviridis
ENSTNIG00000009909
N
0.487
ADAC005115
Anopheles darlingi
ADAC005115
N
0.486
ENSCAFG00000016282
Canis familiaris
ENSCAFG00000016282
I
0.486
ENSOCUG00000004133
Oryctolagus cuniculus
ENSOCUG00000004133
N
0.486
AALB010796
Anopheles albimanus
AALB010796
N
0.486
ENSCJAG00000022832
Callithrix jacchus
ENSCJAG00000022832
N
0.485
ENSDNOG00000005537
Dasypus novemcinctus
ENSDNOG00000005537
N
0.485
ENSOGAG00000029272
Otolemur garnettii
ENSOGAG00000029272
N
0.485
ENSFCAG00000028961
Felis catus
ENSFCAG00000028961
N
0.484
ENSOARG00000010383
Ovis aries
ENSOARG00000010383
N
0.484
ENSOARG00000015382
Ovis aries
ENSOARG00000015382
N
0.484
ENSOARG00000015955
Ovis aries
ENSOARG00000015955
N
0.484
ENSPANG00000007527
Papio anubis
ENSPANG00000007527
N
0.484
Myotis_brandtii_HMGB3_10026974
Myotis brandtii
Myotis_brandtii_HMGB3_10026974
N
0.484
ENSOARG00000020499
Ovis aries
ENSOARG00000020499
N
0.483
ENSGMOG00000010503
Gadus morhua
ENSGMOG00000010503
N
0.481
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.481
HelroG157726
Helobdella robusta
HelroG157726
N
0.479
Myotis_brandtii_Hmgb2_10018437
Myotis brandtii
Myotis_brandtii_Hmgb2_10018437
N
0.479
ENSCJAG00000011146
Callithrix jacchus
ENSCJAG00000011146
N
0.478
Hmgb2l1
Rattus norvegicus
ENSRNOG00000013167
N
0.478
RGD1561694
Rattus norvegicus
ENSRNOG00000029107
N
0.478
Hmgb2
Rattus norvegicus
ENSRNOG00000033321
N
0.478
Bm8632
Brugia malayi
Bm8632
N
0.477
hmgb2a
Danio rerio
ENSDARG00000029722
N
0.477
LOAG_08062
Loa loa
LOAG_08062
N
0.477
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.477
ENSBTAP00000052990-D1
Bos grunniens
ENSBTAP00000052990-D1
N
0.477
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.477
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.477
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.477
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.477
ENSOGAG00000028007
Otolemur garnettii
ENSOGAG00000028007
N
0.476
HNAJ_0000793101
Hymenolepis nana
HNAJ_0000793101
I
0.475
ENSDNOG00000033430
Dasypus novemcinctus
ENSDNOG00000033430
N
0.474
hmgb2.S
Xenopus laevis
XB-GENE-1000251
N
0.474
ENSBTAG00000015315
Bos taurus
ENSBTAG00000015315
N
0.472
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
0.472
SMAC_00615
Sordaria macrospora
SMAC_00615
I
0.472
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
0.472
NCU02819
Neurospora crassa
NCU02819
D
0.472
XP_002159252.1
Hydra magnipapillata
XP_002159252.1
I
0.472
ENSDNOG00000037677
Dasypus novemcinctus
ENSDNOG00000037677
N
0.471
ENSMICG00000016224
Microcebus murinus
ENSMICG00000016224
N
0.470
ENSOCUG00000016030
Oryctolagus cuniculus
ENSOCUG00000016030
N
0.469
ENSCJAG00000007594
Callithrix jacchus
ENSCJAG00000007594
N
0.468
ENSOCUG00000023449
Oryctolagus cuniculus
ENSOCUG00000023449
N
0.468
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.468
ENSGGOG00000027139
Gorilla gorilla
ENSGGOG00000027139
N
0.467
ENSOGAG00000006589
Otolemur garnettii
ENSOGAG00000006589
N
0.464
ENSPFOG00000008464
Poecilia formosa
ENSPFOG00000008464
N
0.463
ENSTBEG00000009427
Tupaia belangeri
ENSTBEG00000009427
N
0.463
ENSTBEG00000012989
Tupaia belangeri
ENSTBEG00000012989
N
0.463
ENSOARG00000002938
Ovis aries
ENSOARG00000002938
N
0.462
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.462
THITE_2121767
Thielavia terrestris
THITE_2121767
I
0.462
ENSCJAG00000007095
Callithrix jacchus
ENSCJAG00000007095
N
0.461
CTHT_0053790
Chaetomium thermophilum
CTHT_0053790
I
0.459
HMGB2
Macaca mulatta
ENSMMUG00000020008
N
0.459
ACHR003271
Anopheles christyi
ACHR003271
I
0.458
ENSMMUG00000007761
Macaca mulatta
ENSMMUG00000007761
N
0.456
ENSMMUP00000010196
Macaca fascicularis
ENSMMUP00000010196
N
0.456
ENSCJAG00000008384
Callithrix jacchus
ENSCJAG00000008384
N
0.454
ENSCPOG00000003985
Cavia porcellus
ENSCPOG00000003985
N
0.454
ENSECAG00000005186
Equus caballus
ENSECAG00000005186
N
0.454
HMGB1
Microcebus murinus
ENSMICG00000006213
N
0.454
ENSMMUG00000001275
Macaca mulatta
ENSMMUG00000001275
N
0.454
ENSMODG00000009238
Monodelphis domestica
ENSMODG00000009238
N
0.454
ENSOARG00000017078
Ovis aries
ENSOARG00000017078
N
0.454
ENSPANG00000005029
Papio anubis
ENSPANG00000005029
N
0.454
ENSPANG00000011105
Papio anubis
ENSPANG00000011105
N
0.454
Hmg1l1
Rattus norvegicus
ENSRNOG00000034130
N
0.454
AC135696.1
Rattus norvegicus
ENSRNOG00000058908
N
0.454
ENSSTOG00000000443
Ictidomys tridecemlineatus
ENSSTOG00000000443
N
0.454
TC012866
Tribolium castaneum
TC012866
N
0.454
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.454
ENSOCUG00000027747
Oryctolagus cuniculus
ENSOCUG00000027747
N
0.453
CJA04355
Caenorhabditis japonica
CJA04355
N
0.452
CRE11852
Caenorhabditis remanei
CRE11852
N
0.452
ENSAMXG00000014832
Astyanax mexicanus
ENSAMXG00000014832
N
0.451
ENSOGAG00000032147
Otolemur garnettii
ENSOGAG00000032147
N
0.451
ENSTBEG00000016187
Tupaia belangeri
ENSTBEG00000016187
N
0.451
ENSCJAG00000008378
Callithrix jacchus
ENSCJAG00000008378
N
0.450
HMGB2
Sus scrofa
ENSSSCG00000009704
N
0.450
hmgb1a
Takifugu rubripes
ENSTRUG00000008452
N
0.450
LCUP005047
Lucilia cuprina
LCUP005047
N
0.450
BAA06440
Xenopus laevis
BAA06440
N
0.448
ENSONIG00000019935
Oreochromis niloticus
ENSONIG00000019935
N
0.446
hmgb2b
Oryzias latipes
ENSORLG00000018687
N
0.446
ENSPFOG00000004794
Poecilia formosa
ENSPFOG00000004794
N
0.446
ENSPPYG00000011668
Pongo abelii
ENSPPYG00000011668
N
0.446
hmgb2b
Tetraodon nigroviridis
ENSTNIG00000004824
N
0.446
hmgb2b
Takifugu rubripes
ENSTRUG00000005015
N
0.446
ENSXMAG00000011106
Xiphophorus maculatus
ENSXMAG00000011106
N
0.446
L889_g9094
Steinernema feltiae
L889_g9094
N
0.445
ASIM_0001178701
Anisakis simplex
ASIM_0001178701
N
0.444
ASU_05994
Ascaris suum
ASU_05994
N
0.444
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.444
hmgb2b
Gasterosteus aculeatus
ENSGACG00000001173
N
0.443
ENSGMOG00000010060
Gadus morhua
ENSGMOG00000010060
N
0.443
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.443
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.443
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.443
L893_g29974
Steinernema glaseri
L893_g29974
N
0.443
L898_g4830
Steinernema monticolum
L898_g4830
N
0.443
HMGB1
Bos taurus
ENSBTAG00000014862
N
0.442
ENSPMAG00000007397
Petromyzon marinus
ENSPMAG00000007397
N
0.442
hmgb1a
Oryzias latipes
ENSORLG00000003400
N
0.441
Hmg1l1
Rattus norvegicus
ENSRNOG00000051482
N
0.441
ENSGGOG00000025769
Gorilla gorilla
ENSGGOG00000025769
N
0.440
mgf024995m
Mimulus guttatus
mgf024995m
I
0.439
ENSCJAG00000003900
Callithrix jacchus
ENSCJAG00000003900
N
0.438
hmgb1a
Danio rerio
ENSDARG00000099175
N
0.436
hmgb3b
Danio rerio
ENSDARG00000006408
N
0.435
ENSDNOG00000035150
Dasypus novemcinctus
ENSDNOG00000035150
N
0.435
ENSECAG00000003655
Equus caballus
ENSECAG00000003655
N
0.435
ENSSTOG00000007009
Ictidomys tridecemlineatus
ENSSTOG00000007009
N
0.435
ENSOGAG00000027183
Otolemur garnettii
ENSOGAG00000027183
N
0.434
MTR_5g082570
Medicago truncatula
MTR_5g082570
I
0.434
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.434
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.434
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.433
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.433
tetur02g08250
Tetranychus urticae
tetur02g08250
N
0.433
ENSCJAG00000033913
Callithrix jacchus
ENSCJAG00000033913
N
0.432
LOC108350839
Rattus norvegicus
ENSRNOG00000038437
N
0.432
AAEL011425
Aedes aegypti
AAEL011425
I
0.431
AMTR_s00109p00094550
Amborella trichopoda
AMTR_s00109p00094550
I
0.431
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.431
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.431
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.431
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.431
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.431
ENSMMUG00000018606
Macaca mulatta
ENSMMUG00000018606
N
0.430
ENSOGAG00000028411
Otolemur garnettii
ENSOGAG00000028411
N
0.429
CLEC003860
Cimex lectularius
CLEC003860
I
0.429
ENSDNOG00000047452
Dasypus novemcinctus
ENSDNOG00000047452
N
0.428
ENSOGAG00000034801
Otolemur garnettii
ENSOGAG00000034801
N
0.428
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.427
CFIO01_13531
Colletotrichum fioriniae
CFIO01_13531
I
0.427
CGGC5_9539
Colletotrichum gloeosporioides
CGGC5_9539
I
0.427
CH063_04081
Colletotrichum higginsianum
CH063_04081
I
0.427
CSUB01_00364
Colletotrichum sublineola
CSUB01_00364
I
0.427
GLRG_01394
Colletotrichum graminicola
GLRG_01394
I
0.427
MGG_01641
Magnaporthe oryzae
MGG_01641
I
0.427
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.427
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.427
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.427
Myotis_brandtii_Hmgb1_10026956
Myotis brandtii
Myotis_brandtii_Hmgb1_10026956
N
0.427
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.426
ENSOGAG00000027410
Otolemur garnettii
ENSOGAG00000027410
N
0.426
ENSOGAG00000033658
Otolemur garnettii
ENSOGAG00000033658
N
0.426
ENSOGAG00000030563
Otolemur garnettii
ENSOGAG00000030563
N
0.425
F503_04824
Ophiostoma piceae uamh
F503_04824
I
0.424
SPBR_04745
Sporothrix brasiliensis
SPBR_04745
I
0.424
Myotis_brandtii_Hmgb1_10003213
Myotis brandtii
Myotis_brandtii_Hmgb1_10003213
N
0.424
ENSOARG00000011611
Ovis aries
ENSOARG00000011611
N
0.423
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.423
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.423
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.423
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.423
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.423
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.423
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.423
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.423
NECAME_17555
Necator americanus
NECAME_17555
N
0.423
NECAME_17981
Necator americanus
NECAME_17981
N
0.423
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.423
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.423
HMGB1
Monodelphis domestica
ENSMODG00000004443
N
0.422
Ppa-hmg-1.1
Pristionchus pacificus
PPA22767
N
0.422
scaffold113-EXSNAP2012.49
Pristionchus exspectatus
scaffold113-EXSNAP2012.49
N
0.422
scaffold1425-EXSNAP2012.3
Pristionchus exspectatus
scaffold1425-EXSNAP2012.3
N
0.422
hmgb1b
Gasterosteus aculeatus
ENSGACG00000011447
N
0.420
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.420
GL11071
Drosophila persimilis
FBgn0148681
N
0.420
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.420
RSKR_0000587700
Rhabditophanes kr3021
RSKR_0000587700
N
0.420
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.420
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.420
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.420
ENSOGAG00000032152
Otolemur garnettii
ENSOGAG00000032152
N
0.419
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.419
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.419
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.417
BBA_01214
Beauveria bassiana
BBA_01214
I
0.415
hmgb1b
Takifugu rubripes
ENSTRUG00000004822
N
0.415