CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RSKR_0000171200
(
Rhabditophanes kr3021
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
RSKR_0000171200
T336854_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RSKR_0000171200.1
Sox
52
120
PKKALTSYFIWLSANRPTLKEKNPEASATDIARAAGKEWKEMDPADKKTWELKAAEDKIRYSKAMESYK
Links
Other
Sox
family TFs
Other
Rhabditophanes kr3021
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RSKR_0000540800
Rhabditophanes kr3021
RSKR_0000540800
N
0.741
RSKR_0000472700
Rhabditophanes kr3021
RSKR_0000472700
N
0.701
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.624
EVEC_0000195001
Enterobius vermicularis
EVEC_0000195001
N
0.509
SMUV_0000856901
Syphacia muris
SMUV_0000856901
N
0.497
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.466
AAEL011425
Aedes aegypti
AAEL011425
I
0.464
ACYPI006576
Acyrthosiphon pisum
ACYPI006576
I
0.455
hmg-3
Caenorhabditis elegans
WBGene00001973
N
0.455
WBGene00244511
Onchocerca volvulus
WBGene00244511
N
0.452
GPUH_0001272801
Gongylonema pulchrum
GPUH_0001272801
N
0.452
GPUH_0001539601
Gongylonema pulchrum
GPUH_0001539601
N
0.452
nOo.2.0.1.g02324
Onchocerca ochengi
nOo.2.0.1.g02324
N
0.452
ML09221a
Mnemiopsis leidyi
ML09221a
N
0.447
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.444
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.444
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.444
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.444
AOL_s00076g81
Arthrobotrys oligospora
AOL_s00076g81
I
0.442
WUBG_03677
Wuchereria bancrofti
WUBG_03677
N
0.439
Bm2524
Brugia malayi
Bm2524
N
0.439
LOAG_04347
Loa loa
LOAG_04347
N
0.439
EEL_0000829801
Elaeophora elaphi
EEL_0000829801
N
0.439
nAv.1.0.1.g03971
Acanthocheilonema viteae
nAv.1.0.1.g03971
N
0.439
nLs.2.1.2.g07238
Litomosoides sigmodontis
nLs.2.1.2.g07238
N
0.439
OFLC_0000770701
Onchocerca flexuosa
OFLC_0000770701
N
0.439
ALUE_0001798401
Ascaris lumbricoides
ALUE_0001798401
N
0.438
ASIM_0000114801
Anisakis simplex
ASIM_0000114801
N
0.438
ASU_13985
Ascaris suum
ASU_13985
N
0.438
TCNE_0001783901
Toxocara canis
TCNE_0001783901
N
0.438
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.436
nDi.2.2.2.g07477
Dirofilaria immitis
nDi.2.2.2.g07477
N
0.433
JL09_g4543
Pichia kudriavzevii
JL09_g4543
N
0.427
CLEC003860
Cimex lectularius
CLEC003860
I
0.426
SPAL_0001421900
Strongyloides papillosus
SPAL_0001421900
N
0.426
SSTP_0000790100
Strongyloides stercoralis
SSTP_0000790100
N
0.426
SVE_0536900
Strongyloides venezuelensis
SVE_0536900
N
0.426
CRE03995
Caenorhabditis remanei
CRE03995
N
0.425
gw.283.36.1
Branchiostoma floridae
gw.283.36.1
N
0.424
gw.77.73.1
Branchiostoma floridae
gw.77.73.1
N
0.424
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.423
GSTUM_00011974001
Tuber melanosporum
GSTUM_00011974001
I
0.422
SAPIO_CDS3355
Scedosporium apiospermum
SAPIO_CDS3355
I
0.421
ADAC005115
Anopheles darlingi
ADAC005115
N
0.418
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
0.418
AALB010796
Anopheles albimanus
AALB010796
N
0.418
DRE_06603
Drechslerella stenobrocha
DRE_06603
I
0.417