CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
RSKR_0000472700
(
Rhabditophanes kr3021
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
RSKR_0000472700
T336862_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RSKR_0000472700.1
Sox
97
165
PKKALTSYFIWLSANRPILKEKNPGASATDIARAAGKEWKELGPDDKKTWELKAAEDKIRYSKAMESYN
Links
Other
Sox
family TFs
Other
Rhabditophanes kr3021
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RSKR_0000171200
Rhabditophanes kr3021
RSKR_0000171200
N
0.701
RSKR_0000540800
Rhabditophanes kr3021
RSKR_0000540800
N
0.701
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.591
ML09221a
Mnemiopsis leidyi
ML09221a
N
0.473
EVEC_0000195001
Enterobius vermicularis
EVEC_0000195001
N
0.469
JL09_g4543
Pichia kudriavzevii
JL09_g4543
N
0.460
SMUV_0000856901
Syphacia muris
SMUV_0000856901
N
0.457
WBGene00244511
Onchocerca volvulus
WBGene00244511
N
0.445
GPUH_0001272801
Gongylonema pulchrum
GPUH_0001272801
N
0.445
GPUH_0001539601
Gongylonema pulchrum
GPUH_0001539601
N
0.445
nOo.2.0.1.g02324
Onchocerca ochengi
nOo.2.0.1.g02324
N
0.445
Lus10018073.g
Linum usitatissimum
Lus10018073.g
N
0.441
Lus10042065.g
Linum usitatissimum
Lus10042065.g
N
0.441
ALUE_0001798401
Ascaris lumbricoides
ALUE_0001798401
N
0.438
ASIM_0000114801
Anisakis simplex
ASIM_0000114801
N
0.438
ASU_13985
Ascaris suum
ASU_13985
N
0.438
TCNE_0001783901
Toxocara canis
TCNE_0001783901
N
0.438
WUBG_03677
Wuchereria bancrofti
WUBG_03677
N
0.433
Bm2524
Brugia malayi
Bm2524
N
0.433
LOAG_04347
Loa loa
LOAG_04347
N
0.433
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.433
EEL_0000829801
Elaeophora elaphi
EEL_0000829801
N
0.433
nAv.1.0.1.g03971
Acanthocheilonema viteae
nAv.1.0.1.g03971
N
0.433
nDi.2.2.2.g07477
Dirofilaria immitis
nDi.2.2.2.g07477
N
0.433
nLs.2.1.2.g07238
Litomosoides sigmodontis
nLs.2.1.2.g07238
N
0.433
OFLC_0000770701
Onchocerca flexuosa
OFLC_0000770701
N
0.433
AAEL011425
Aedes aegypti
AAEL011425
I
0.431
gw.283.36.1
Branchiostoma floridae
gw.283.36.1
N
0.430
gw.77.73.1
Branchiostoma floridae
gw.77.73.1
N
0.430
ACYPI006576
Acyrthosiphon pisum
ACYPI006576
I
0.422
hmg-3
Caenorhabditis elegans
WBGene00001973
N
0.421
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
0.418