RO3G_07013 (Rhizopus oryzae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 RO3G_07013 T326103_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.469 0.537
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RO3T_07012 Sox 186 252

Links

Other Sox family TFs
Other Rhizopus oryzae TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgeneshMC_pg.C_20910 Mucor circinelloides estExt_fgeneshMC_pg.C_20910 I 0.716
RO3G_15755 Rhizopus oryzae RO3G_15755 I 0.651
RO3G_16060 Rhizopus oryzae RO3G_16060 I 0.637
fgeneshMC_pg.3_#_1190 Mucor circinelloides fgeneshMC_pg.3_#_1190 I 0.625
fgeneshMC_pg.1_#_1771 Mucor circinelloides fgeneshMC_pg.1_#_1771 I 0.606
gw1.72.30.1 Phycomyces blakesleeanus gw1.72.30.1 I 0.601
RO3G_09728 Rhizopus oryzae RO3G_09728 I 0.572
RO3G_07543 Rhizopus oryzae RO3G_07543 I 0.568
gw1.16.190.1 Phycomyces blakesleeanus gw1.16.190.1 N 0.564
e_gw1.30.104.1 Phycomyces blakesleeanus e_gw1.30.104.1 N 0.563
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I 0.547
GSTUM_00011974001 Tuber melanosporum GSTUM_00011974001 I 0.547
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.532
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I 0.532
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.532
GB43084 Apis mellifera GB43084 I 0.532
HMEL005034 Heliconius melpomene HMEL005034 I 0.532
KGM_14572 Danaus plexippus KGM_14572 I 0.532
MCINX005468 Melitaea cinxia MCINX005468 I 0.532
NV10488 Nasonia vitripennis NV10488 I 0.532
TC012723 Tribolium castaneum TC012723 I 0.532
LotgiG109021 Lottia gigantea LotgiG109021 I 0.530
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.525
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.523
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.522
ISCW015985 Ixodes scapularis ISCW015985 N 0.517
SAPIO_CDS3355 Scedosporium apiospermum SAPIO_CDS3355 I 0.517
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.517
DRE_06603 Drechslerella stenobrocha DRE_06603 I 0.515
ADAC003252 Anopheles darlingi ADAC003252 I 0.505
AGAP000281 Anopheles gambiae AGAP000281 I 0.505
ISCW018867 Ixodes scapularis ISCW018867 I 0.505
RPRC000650 Rhodnius prolixus RPRC000650 I 0.505
CLEC001918 Cimex lectularius CLEC001918 I 0.505
HHAL000823-PA Halyomorpha halys HHAL000823-PA I 0.505
AALB006415 Anopheles albimanus AALB006415 I 0.505
AARA010616 Anopheles arabiensis AARA010616 I 0.505
AATE016215 Anopheles atroparvus AATE016215 I 0.505
ACUA004409 Anopheles culicifacies ACUA004409 I 0.505
AFAF011136 Anopheles farauti AFAF011136 I 0.505
AMEC012857 Anopheles melas AMEC012857 I 0.505
AMEM006878 Anopheles merus AMEM006878 I 0.505
ASIS016667 Anopheles sinensis ASIS016667 I 0.505
ASTEI07799 Anopheles stephensi ASTEI07799 I 0.505
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N 0.504
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N 0.504
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N 0.504
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.504
TMUE_s0011001600 Trichuris muris TMUE_s0011001600 I 0.502
TTRE_0000401801 Trichuris trichiura TTRE_0000401801 I 0.502
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I 0.500
LCUP006200 Lucilia cuprina LCUP006200 N 0.499
MDOA008605 Musca domestica MDOA008605 N 0.499
tox2 Gasterosteus aculeatus ENSGACG00000006914 N 0.498
tox2 Oryzias latipes ENSORLG00000004818 N 0.498
ENSPFOG00000002336 Poecilia formosa ENSPFOG00000002336 N 0.498
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N 0.498
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N 0.498
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N 0.498
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.496
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N 0.495
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.495
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N 0.495
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N 0.495
XP_002936155 Xenopus tropicalis XP_002936155 N 0.495
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.493
MVLG_01270 Microbotryum violaceum MVLG_01270 I 0.486
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N 0.483
D918_09264 Trichuris suis D918_09264 N 0.480
TMUE_s0009009400 Trichuris muris TMUE_s0009009400 N 0.480
TTRE_0000108401 Trichuris trichiura TTRE_0000108401 N 0.480
A1O1_01197 Capronia coronata A1O1_01197 I 0.475
A1O3_08778 Capronia epimyces A1O3_08778 I 0.475
A1O5_06047 Cladophialophora psammophila A1O5_06047 I 0.475
A1O7_01726 Cladophialophora yegresii A1O7_01726 I 0.475
G647_10093 Cladophialophora carrionii G647_10093 I 0.475
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I 0.475
OIDMADRAFT_143526 Oidiodendron maius OIDMADRAFT_143526 I 0.475
PV04_00198 Capronia semiimmersa PV04_00198 I 0.475
PV05_09944 Exophiala xenobiotica PV05_09944 I 0.475
PV06_04154 Exophiala oligosperma PV06_04154 I 0.475
PV07_09313 Cladophialophora immunda PV07_09313 I 0.475
PV08_04655 Exophiala spinifera PV08_04655 I 0.475
PV10_01993 Exophiala mesophila PV10_01993 I 0.475
PV11_09703 Exophiala sideris PV11_09703 I 0.475
Z517_02317 Fonsecaea pedrosoi Z517_02317 I 0.475
Z518_04911 Rhinocladiella mackenziei Z518_04911 I 0.475
Z519_04692 Cladophialophora bantiana Z519_04692 I 0.475
PGTG_10028 Puccinia graminis PGTG_10028 I 0.474
PGTG_12120 Puccinia graminis PGTG_12120 I 0.474
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I 0.473
ENSONIG00000000284 Oreochromis niloticus ENSONIG00000000284 N 0.471
tox4b Oryzias latipes ENSORLG00000008779 N 0.471
tox4b Tetraodon nigroviridis ENSTNIG00000003691 N 0.471
tox4b Takifugu rubripes ENSTRUG00000002594 N 0.471
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.470
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.470
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.469
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.469
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.469
NCU02819 Neurospora crassa NCU02819 D 0.469
MELLADRAFT_85039 Melampsora laricipopulina MELLADRAFT_85039 I 0.468
nRc.2.0.1.g42996 Romanomermis culicivorax nRc.2.0.1.g42996 N 0.466
EFV61455 Trichinella spiralis EFV61455 N 0.465
D917_02150 Trichinella nativa D917_02150 N 0.465
tox4b Danio rerio ENSDARG00000100163 I 0.464
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N 0.464
tox4.S Xenopus laevis XB-GENE-993810 I 0.464
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I 0.462
RO3G_05222 Rhizopus oryzae RO3G_05222 N 0.460
THITE_2121767 Thielavia terrestris THITE_2121767 I 0.458
M408DRAFT_328926 Serendipita vermifera M408DRAFT_328926 I 0.457
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I 0.456
E5Q_03709 Mixia osmundae E5Q_03709 N 0.456
RSKR_0000733200 Rhabditophanes kr3021 RSKR_0000733200 N 0.456
EV44_g2383 Erysiphe necator EV44_g2383 I 0.455
MBM_02410 Marssonina brunnea MBM_02410 I 0.455
O9G_002262 Rozella allomycis O9G_002262 I 0.455
PAAG_05470 Paracoccidioides sp lutzii PAAG_05470 N 0.455
SBOR_0403 Sclerotinia borealis SBOR_0403 I 0.455
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I 0.455
HelroG145107 Helobdella robusta HelroG145107 N 0.454
PABG_05916 Paracoccidioides brasiliensis PABG_05916 N 0.454
WUBG_03914 Wuchereria bancrofti WUBG_03914 N 0.453
Bm4188 Brugia malayi Bm4188 N 0.453
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.453
LOAG_18151 Loa loa LOAG_18151 N 0.453
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.453
EEL_0000223401 Elaeophora elaphi EEL_0000223401 N 0.453
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N 0.453
nDi.2.2.2.g11099 Dirofilaria immitis nDi.2.2.2.g11099 N 0.453
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.453
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.453
PV09_06039 Verruconis gallopava PV09_06039 N 0.452
GMDG_05273 Pseudogymnoascus destructans GMDG_05273 I 0.449
V499_08602 Pseudogymnoascus pannorum V499_08602 I 0.449
CLEC003860 Cimex lectularius CLEC003860 I 0.449
M7I_1578 Glarea lozoyensis M7I_1578 I 0.448
PIIN_05794 Piriformospora indica PIIN_05794 I 0.448
PODANS_1_7390 Podospora anserina PODANS_1_7390 I 0.448
BDDG_03827 Blastomyces dermatitidis BDDG_03827 N 0.447
GPUH_0000021901 Gongylonema pulchrum GPUH_0000021901 N 0.447
A1O9_00742 Exophiala aquamarina A1O9_00742 I 0.443
BOTBODRAFT_30512 Botryobasidium botryosum BOTBODRAFT_30512 N 0.440
TTHERM_00216040 Tetrahymena thermophila TTHERM_00216040 N 0.439
ACEP19638 Atta cephalotes ACEP19638 I 0.433
PVAR5_2976 Byssochlamys spectabilis PVAR5_2976 N 0.429
ENSCING00000018888 Ciona intestinalis ENSCING00000018888 N 0.427
UCRNP2_5474 Neofusicoccum parvum UCRNP2_5474 N 0.427
fgenesh2_pg.scaffold_121000046 Branchiostoma floridae fgenesh2_pg.scaffold_121000046 N 0.427
fgenesh2_pg.scaffold_16000083 Branchiostoma floridae fgenesh2_pg.scaffold_16000083 N 0.427
SMU15029818 Schmidtea mediterranea SMU15029818 I 0.426
FFUJ_02729 Fusarium fujikuroi FFUJ_02729 I 0.425
S40288_09735 Stachybotrys chartarum S40288_09735 I 0.425
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.424
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N 0.424
Bcin01g08840 Botrytis cinerea Bcin01g08840 I 0.423
MGG_01641 Magnaporthe oryzae MGG_01641 I 0.422
VDBG_04589 Verticillium albo atrum VDBG_04589 I 0.421
VDAG_04140 Verticillium dahliae VDAG_04140 I 0.421
VDAG_09161 Verticillium dahliae VDAG_09161 I 0.421
VDBG_04589 Verticillium alfalfae VDBG_04589 I 0.421
W97_04202 Coniosporium apollinis W97_04202 I 0.418
BGHDH14_bgh04339 Blumeria graminis BGHDH14_bgh04339 I 0.417
AUEXF2481DRAFT_32739 Aureobasidium subglaciale AUEXF2481DRAFT_32739 I 0.416
M437DRAFT_15090 Aureobasidium melanogenum M437DRAFT_15090 I 0.416
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.415