CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30024549m.g
(
Saccoglossus kowalevskii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Sakowv30024549m.g
T334349_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23935962_peptide
Sox
284
352
PQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDSLGVEQKQVYKQNTEAAKKEYLKKLAAYR
23935963_peptide
Sox
284
352
PQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDSLGVEQKQVYKQNTEAAKKEYLKKLAAYR
23935964_peptide
Sox
267
335
PQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDSLGVEQKQVYKQNTEAAKKEYLKKLAAYR
23935965_peptide
Sox
225
293
PQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDSLGVEQKQVYKQNTEAAKKEYLKKLAAYR
23935966_peptide
Sox
225
293
PQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDSLGVEQKQVYKQNTEAAKKEYLKKLAAYR
23935967_peptide
Sox
225
293
PQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDSLGVEQKQVYKQNTEAAKKEYLKKLAAYR
23935968_peptide
Sox
225
293
PQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDSLGVEQKQVYKQNTEAAKKEYLKKLAAYR
23935969_peptide
Sox
225
293
PQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDSLGVEQKQVYKQNTEAAKKEYLKKLAAYR
Links
Other
Sox
family TFs
Other
Saccoglossus kowalevskii
TFs
175 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
tox4a
Gasterosteus aculeatus
ENSGACG00000014107
I
0.720
DAPPUDRAFT_19853
Daphnia pulex
DAPPUDRAFT_19853
I
0.720
NV10488
Nasonia vitripennis
NV10488
I
0.720
MCINX005468
Melitaea cinxia
MCINX005468
I
0.720
HMEL005034
Heliconius melpomene
HMEL005034
I
0.720
ISCW015985
Ixodes scapularis
ISCW015985
N
0.720
KGM_14572
Danaus plexippus
KGM_14572
I
0.720
BGIBMGA006848
Bombyx mori
BGIBMGA006848
I
0.720
TC012723
Tribolium castaneum
TC012723
I
0.720
SPU_002060
Strongylocentrotus purpuratus
SPU_002060
N
0.716
CGI_10017717
Crassostrea gigas
CGI_10017717
I
0.715
LotgiG109021
Lottia gigantea
LotgiG109021
I
0.714
GB43084
Apis mellifera
GB43084
I
0.711
ENSGMOG00000015161
Gadus morhua
ENSGMOG00000015161
I
0.702
RPRC000650
Rhodnius prolixus
RPRC000650
I
0.693
ACUA004409
Anopheles culicifacies
ACUA004409
I
0.693
AMEC012857
Anopheles melas
AMEC012857
I
0.693
ASTEI07799
Anopheles stephensi
ASTEI07799
I
0.693
ISCW018867
Ixodes scapularis
ISCW018867
I
0.693
ASIS016667
Anopheles sinensis
ASIS016667
I
0.693
AMEM006878
Anopheles merus
AMEM006878
I
0.693
AATE016215
Anopheles atroparvus
AATE016215
I
0.693
AFAF011136
Anopheles farauti
AFAF011136
I
0.693
AGAP000281
Anopheles gambiae
AGAP000281
I
0.693
CLEC001918
Cimex lectularius
CLEC001918
I
0.693
AARA010616
Anopheles arabiensis
AARA010616
I
0.693
TMUE_s0011001600
Trichuris muris
TMUE_s0011001600
I
0.693
AALB006415
Anopheles albimanus
AALB006415
I
0.693
ADAC003252
Anopheles darlingi
ADAC003252
I
0.693
HHAL000823-PA
Halyomorpha halys
HHAL000823-PA
I
0.693
TTRE_0000401801
Trichuris trichiura
TTRE_0000401801
I
0.693
fgenesh2_pg.scaffold_19000069
Branchiostoma floridae
fgenesh2_pg.scaffold_19000069
N
0.692
XP_002936155
Xenopus tropicalis
XP_002936155
N
0.692
fgenesh2_pg.scaffold_177000008
Branchiostoma floridae
fgenesh2_pg.scaffold_177000008
N
0.692
ACYPI005775
Acyrthosiphon pisum
ACYPI005775
I
0.688
tox2
Oryzias latipes
ENSORLG00000004818
N
0.686
ENSSSCG00000023554
Sus scrofa
ENSSSCG00000023554
N
0.686
Ocbimv22012197m.g
Octopus bimaculoides
Ocbimv22012197m.g
I
0.686
ENSPFOG00000008402
Poecilia formosa
ENSPFOG00000008402
N
0.686
ENSXMAG00000016763
Xiphophorus maculatus
ENSXMAG00000016763
N
0.686
ENSTGUG00000003811
Taeniopygia guttata
ENSTGUG00000003811
N
0.686
ENSGMOG00000008081
Gadus morhua
ENSGMOG00000008081
N
0.686
ENSGMOG00000013406
Gadus morhua
ENSGMOG00000013406
N
0.686
tox2
Gasterosteus aculeatus
ENSGACG00000006914
N
0.686
tox2
Takifugu rubripes
ENSTRUG00000013848
N
0.686
tox2
Tetraodon nigroviridis
ENSTNIG00000005683
N
0.686
ENSONIG00000016627
Oreochromis niloticus
ENSONIG00000016627
N
0.685
ENSXMAG00000000362
Xiphophorus maculatus
ENSXMAG00000000362
I
0.680
TMUE_s0009009400
Trichuris muris
TMUE_s0009009400
N
0.677
TTRE_0000108401
Trichuris trichiura
TTRE_0000108401
N
0.677
Cflo_00230--XP_624018.2_APIME
Camponotus floridanus
Cflo_00230--XP_624018.2_APIME
N
0.677
D918_09264
Trichuris suis
D918_09264
N
0.677
ENSPFOG00000002336
Poecilia formosa
ENSPFOG00000002336
N
0.665
tox4b
Takifugu rubripes
ENSTRUG00000002594
N
0.665
tox4b
Oryzias latipes
ENSORLG00000008779
N
0.665
ENSONIG00000000284
Oreochromis niloticus
ENSONIG00000000284
N
0.665
tox4b
Tetraodon nigroviridis
ENSTNIG00000003691
N
0.665
tox4.S
Xenopus laevis
XB-GENE-993810
I
0.659
tox4b
Danio rerio
ENSDARG00000100163
I
0.659
ENSGGOG00000025016
Gorilla gorilla
ENSGGOG00000025016
I
0.653
LOAG_18151
Loa loa
LOAG_18151
N
0.652
WUBG_03914
Wuchereria bancrofti
WUBG_03914
N
0.652
nDi.2.2.2.g11099
Dirofilaria immitis
nDi.2.2.2.g11099
N
0.652
Bm4188
Brugia malayi
Bm4188
N
0.652
HelroG145107
Helobdella robusta
HelroG145107
N
0.651
nAv.1.0.1.g02116
Acanthocheilonema viteae
nAv.1.0.1.g02116
N
0.649
EEL_0000223401
Elaeophora elaphi
EEL_0000223401
N
0.649
nRc.2.0.1.g42996
Romanomermis culicivorax
nRc.2.0.1.g42996
N
0.649
GPUH_0000021901
Gongylonema pulchrum
GPUH_0000021901
N
0.644
EFV61455
Trichinella spiralis
EFV61455
N
0.643
D917_02150
Trichinella nativa
D917_02150
N
0.643
ENSCSAVG00000009270
Ciona savignyi
ENSCSAVG00000009270
N
0.635
nOo.2.0.1.g12207
Onchocerca ochengi
nOo.2.0.1.g12207
N
0.633
OFLC_0001222801
Onchocerca flexuosa
OFLC_0001222801
N
0.633
WBGene00236865
Onchocerca volvulus
WBGene00236865
N
0.633
ENSMMUG00000014077
Macaca mulatta
ENSMMUG00000014077
N
0.631
ENSCING00000009516
Ciona intestinalis
ENSCING00000009516
N
0.629
nLs.2.1.2.g04689
Litomosoides sigmodontis
nLs.2.1.2.g04689
N
0.623
LCUP006200
Lucilia cuprina
LCUP006200
N
0.615
ACEP19638
Atta cephalotes
ACEP19638
I
0.614
SMU15029818
Schmidtea mediterranea
SMU15029818
I
0.610
MDOA008605
Musca domestica
MDOA008605
N
0.605
BTMF_0001006201
Brugia timori
BTMF_0001006201
I
0.589
ASIM_0001958001
Anisakis simplex
ASIM_0001958001
N
0.580
L798_00437
Zootermopsis nevadensis
L798_00437
N
0.538
AMIN005634
Anopheles minimus
AMIN005634
N
0.538
TCLT_0000844001
Thelazia callipaeda
TCLT_0000844001
N
0.537
TTHERM_00216040
Tetrahymena thermophila
TTHERM_00216040
N
0.537
EFV52201
Trichinella spiralis
EFV52201
N
0.535
D918_03887
Trichuris suis
D918_03887
N
0.532
AEPI010254
Anopheles epiroticus
AEPI010254
N
0.532
CPIJ003178
Culex quinquefasciatus
CPIJ003178
N
0.532
AMAM014030
Anopheles maculatus
AMAM014030
N
0.532
CpipJ_CPIJ003178
Culex pipiens
CpipJ_CPIJ003178
N
0.532
AFUN005717
Anopheles funestus
AFUN005717
N
0.532
ENSMMUP00000034886
Macaca fascicularis
ENSMMUP00000034886
N
0.524
Eucgr.I01920
Eucalyptus grandis
Eucgr.I01920
N
0.522
RO3G_07013
Rhizopus oryzae
RO3G_07013
I
0.517
estExt_fgeneshMC_pg.C_20910
Mucor circinelloides
estExt_fgeneshMC_pg.C_20910
I
0.517
ENSTGUG00000014902
Taeniopygia guttata
ENSTGUG00000014902
N
0.511
MESCA003479
Megaselia scalaris
MESCA003479
N
0.507
TOX2
Sorex araneus
ENSSARG00000001080
N
0.505
Hsal_06265--XP_624018.2_APIME
Harpegnathos saltator
Hsal_06265--XP_624018.2_APIME
N
0.498
RO3G_05222
Rhizopus oryzae
RO3G_05222
N
0.497
RO3G_15755
Rhizopus oryzae
RO3G_15755
I
0.495
DME_0000632401
Dracunculus medinensis
DME_0000632401
N
0.487
fgeneshMC_pg.1_#_1771
Mucor circinelloides
fgeneshMC_pg.1_#_1771
I
0.485
tetur31g00660
Tetranychus urticae
tetur31g00660
N
0.484
tetur31g00840
Tetranychus urticae
tetur31g00840
N
0.484
tetur31g01070
Tetranychus urticae
tetur31g01070
N
0.484
ACAC_0000973801
Angiostrongylus cantonensis
ACAC_0000973801
N
0.481
ANCCAN_09463
Ancylostoma caninum
ANCCAN_09463
N
0.481
ANCCEY_15918
Ancylostoma ceylanicum
ANCCEY_15918
N
0.481
HCOI00076900
Haemonchus contortus
HCOI00076900
N
0.481
OESDEN_01314
Oesophagostomum dentatum
OESDEN_01314
N
0.481
ANCDUO_06783
Ancylostoma duodenale
ANCDUO_06783
N
0.481
SVUK_0000363901
Strongylus vulgaris
SVUK_0000363901
N
0.481
ANCCEY_15064
Ancylostoma ceylanicum
ANCCEY_15064
N
0.481
NECAME_01599
Necator americanus
NECAME_01599
N
0.481
TELCIR_16246
Teladorsagia circumcincta
TELCIR_16246
N
0.481
scaffold517-EXSNAP2012.7
Pristionchus exspectatus
scaffold517-EXSNAP2012.7
N
0.481
DICVIV_00270
Dictyocaulus viviparus
DICVIV_00270
N
0.481
HCOI01215700
Haemonchus contortus
HCOI01215700
N
0.481
L892_g13433
Steinernema scapterisci
L892_g13433
I
0.476
PHUM393920
Pediculus humanus
PHUM393920
N
0.476
L596_g21045
Steinernema carpocapsae
L596_g21045
I
0.474
L889_g13125
Steinernema feltiae
L889_g13125
N
0.474
fgeneshMC_pg.3_#_1190
Mucor circinelloides
fgeneshMC_pg.3_#_1190
I
0.470
RSKR_0000620800
Rhabditophanes kr3021
RSKR_0000620800
N
0.467
TCNE_0000652201
Toxocara canis
TCNE_0000652201
N
0.467
nRc.2.0.1.g36724
Romanomermis culicivorax
nRc.2.0.1.g36724
N
0.467
ALUE_0000699101
Ascaris lumbricoides
ALUE_0000699101
N
0.461
ASU_00726
Ascaris suum
ASU_00726
N
0.461
RO3G_16060
Rhizopus oryzae
RO3G_16060
I
0.455
ENSAPLG00000003986
Anas platyrhynchos
ENSAPLG00000003986
N
0.453
RO3G_07543
Rhizopus oryzae
RO3G_07543
I
0.453
AOL_s00076g81
Arthrobotrys oligospora
AOL_s00076g81
I
0.449
Myotis_brandtii_DAP3_10031965
Myotis brandtii
Myotis_brandtii_DAP3_10031965
N
0.449
SAPIO_CDS3355
Scedosporium apiospermum
SAPIO_CDS3355
I
0.449
Hmgb1
Rattus norvegicus
ENSRNOG00000029813
N
0.445
O9G_002262
Rozella allomycis
O9G_002262
I
0.444
SPAL_0001270100
Strongyloides papillosus
SPAL_0001270100
N
0.442
PTRK_0000294100
Parastrongyloides trichosuri
PTRK_0000294100
N
0.442
SVE_0367300
Strongyloides venezuelensis
SVE_0367300
N
0.442
SSTP_0001066100
Strongyloides stercoralis
SSTP_0001066100
N
0.442
nRc.2.0.1.g21669
Romanomermis culicivorax
nRc.2.0.1.g21669
N
0.441
RO3G_09728
Rhizopus oryzae
RO3G_09728
I
0.436
MhA1_Contig232.frz3.gene23
Meloidogyne hapla
MhA1_Contig232.frz3.gene23
N
0.436
Minc06622
Meloidogyne incognita
Minc06622
N
0.436
BGLB013489
Biomphalaria glabrata
BGLB013489
N
0.434
EDI_340970
Entamoeba dispar
EDI_340970
N
0.432
gw1.72.30.1
Phycomyces blakesleeanus
gw1.72.30.1
I
0.429
D917_05048
Trichinella nativa
D917_05048
N
0.428
EFV56095
Trichinella spiralis
EFV56095
N
0.428
CJA30740
Caenorhabditis japonica
CJA30740
N
0.427
CJA03316
Caenorhabditis japonica
CJA03316
N
0.427
CBN07735
Caenorhabditis brenneri
CBN07735
N
0.427
GK17179
Drosophila willistoni
FBgn0219178
N
0.427
CRE14258
Caenorhabditis remanei
CRE14258
N
0.427
pbrm-1
Caenorhabditis elegans
WBGene00007042
N
0.427
CBN31697
Caenorhabditis brenneri
CBN31697
N
0.427
CBG11867
Caenorhabditis briggsae
CBG11867
N
0.427
GL20738
Drosophila persimilis
FBgn0158333
N
0.424
GA11397
Drosophila pseudoobscura
FBgn0071451
N
0.424
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.423
ACYPI001480
Acyrthosiphon pisum
ACYPI001480
N
0.422
GSTUM_00011974001
Tuber melanosporum
GSTUM_00011974001
I
0.422
GG14588
Drosophila erecta
FBgn0106844
N
0.418
DRE_06603
Drechslerella stenobrocha
DRE_06603
I
0.417
SSTP_0000878000
Strongyloides stercoralis
SSTP_0000878000
N
0.416
ACUA025632
Anopheles culicifacies
ACUA025632
N
0.416
PTRK_0001310900
Parastrongyloides trichosuri
PTRK_0001310900
N
0.416
SPAL_0001274100
Strongyloides papillosus
SPAL_0001274100
N
0.416
SVE_0827400
Strongyloides venezuelensis
SVE_0827400
N
0.416