nRc.2.0.1.g36724 (Romanomermis culicivorax)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 nRc.2.0.1.g36724 T336764_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
nRc.2.0.1.t36724-RA Sox 136 204

Links

Other Sox family TFs
Other Romanomermis culicivorax TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nRc.2.0.1.g21669 Romanomermis culicivorax nRc.2.0.1.g21669 N 0.528
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.496
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.467
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.465
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.465
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I 0.465
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.465
GB43084 Apis mellifera GB43084 I 0.465
HMEL005034 Heliconius melpomene HMEL005034 I 0.465
ISCW015985 Ixodes scapularis ISCW015985 N 0.465
KGM_14572 Danaus plexippus KGM_14572 I 0.465
MCINX005468 Melitaea cinxia MCINX005468 I 0.465
NV10488 Nasonia vitripennis NV10488 I 0.465
TC012723 Tribolium castaneum TC012723 I 0.465
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.461
LotgiG109021 Lottia gigantea LotgiG109021 I 0.459
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.455
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I 0.442
LCUP006200 Lucilia cuprina LCUP006200 N 0.441
MDOA008605 Musca domestica MDOA008605 N 0.440
ADAC003252 Anopheles darlingi ADAC003252 I 0.438
AGAP000281 Anopheles gambiae AGAP000281 I 0.438
ISCW018867 Ixodes scapularis ISCW018867 I 0.438
RPRC000650 Rhodnius prolixus RPRC000650 I 0.438
CLEC001918 Cimex lectularius CLEC001918 I 0.438
HHAL000823-PA Halyomorpha halys HHAL000823-PA I 0.438
AALB006415 Anopheles albimanus AALB006415 I 0.438
AARA010616 Anopheles arabiensis AARA010616 I 0.438
AATE016215 Anopheles atroparvus AATE016215 I 0.438
ACUA004409 Anopheles culicifacies ACUA004409 I 0.438
AFAF011136 Anopheles farauti AFAF011136 I 0.438
AMEC012857 Anopheles melas AMEC012857 I 0.438
AMEM006878 Anopheles merus AMEM006878 I 0.438
ASIS016667 Anopheles sinensis ASIS016667 I 0.438
ASTEI07799 Anopheles stephensi ASTEI07799 I 0.438
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N 0.438
TMUE_s0011001600 Trichuris muris TMUE_s0011001600 I 0.438
TTRE_0000401801 Trichuris trichiura TTRE_0000401801 I 0.438
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N 0.436
nRc.2.0.1.g42996 Romanomermis culicivorax nRc.2.0.1.g42996 N 0.436
WUBG_03914 Wuchereria bancrofti WUBG_03914 N 0.434
Bm4188 Brugia malayi Bm4188 N 0.434
LOAG_18151 Loa loa LOAG_18151 N 0.434
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.434
nDi.2.2.2.g11099 Dirofilaria immitis nDi.2.2.2.g11099 N 0.434
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.434
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.434
ACEP19638 Atta cephalotes ACEP19638 I 0.433
RO3G_05222 Rhizopus oryzae RO3G_05222 N 0.432
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.432
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.432
EEL_0000223401 Elaeophora elaphi EEL_0000223401 N 0.432
GPUH_0000021901 Gongylonema pulchrum GPUH_0000021901 N 0.432
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N 0.431
ENSPFOG00000002336 Poecilia formosa ENSPFOG00000002336 N 0.431
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N 0.431
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N 0.431
XP_002936155 Xenopus tropicalis XP_002936155 N 0.431
tox2 Gasterosteus aculeatus ENSGACG00000006914 N 0.425
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N 0.425
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N 0.425
tox2 Oryzias latipes ENSORLG00000004818 N 0.425
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N 0.425
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N 0.425
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N 0.425
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N 0.425
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.425
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N 0.425
HelroG145107 Helobdella robusta HelroG145107 N 0.425
D918_09264 Trichuris suis D918_09264 N 0.422
TMUE_s0009009400 Trichuris muris TMUE_s0009009400 N 0.422
TTRE_0000108401 Trichuris trichiura TTRE_0000108401 N 0.422