CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAVG00000011755
(
Ciona savignyi
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSCSAVG00000011755
T327830_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAVP00000020027
Sox
543
611
PKRPSSAYFLWLADNRARIKSENPGISITEISKQAGKEWKQVEPSDKAKYEKQYQKEKVKFEEAMRKYK
Links
Other
Sox
family TFs
Other
Ciona savignyi
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ssrp1a
Danio rerio
ENSDARG00000037397
I
0.574
ENSAMXG00000014826
Astyanax mexicanus
ENSAMXG00000014826
N
0.548
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.519
CGI_10024258
Crassostrea gigas
CGI_10024258
N
0.514
LotgiG207546
Lottia gigantea
LotgiG207546
N
0.510
Ocbimv22006454m.g
Octopus bimaculoides
Ocbimv22006454m.g
N
0.467
AATE003884
Anopheles atroparvus
AATE003884
N
0.467
ASIS014507
Anopheles sinensis
ASIS014507
N
0.467
CLEC003860
Cimex lectularius
CLEC003860
I
0.465
Sakowv30021656m.g
Saccoglossus kowalevskii
Sakowv30021656m.g
N
0.462
HNAJ_0000793101
Hymenolepis nana
HNAJ_0000793101
I
0.462
BGLB002303
Biomphalaria glabrata
BGLB002303
N
0.454
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.453
ACAC_0000857301
Angiostrongylus cantonensis
ACAC_0000857301
N
0.445
ACOC_0000653601
Angiostrongylus costaricensis
ACOC_0000653601
N
0.445
ADIR000496
Anopheles dirus
ADIR000496
N
0.437
AFAF013045
Anopheles farauti
AFAF013045
N
0.437
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.430
GL11071
Drosophila persimilis
FBgn0148681
N
0.430
DICVIV_01337
Dictyocaulus viviparus
DICVIV_01337
N
0.428
SapurV1A.3543s0020
Salix purpurea
SapurV1A.3543s0020
N
0.427
HCOI00417600
Haemonchus contortus
HCOI00417600
N
0.422
HPLM_0000803901
Haemonchus placei
HPLM_0000803901
N
0.422
TELCIR_05217
Teladorsagia circumcincta
TELCIR_05217
N
0.422
TELCIR_22690
Teladorsagia circumcincta
TELCIR_22690
N
0.422
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.418
ANCCAN_21637
Ancylostoma caninum
ANCCAN_21637
N
0.416
ANCCEY_10464
Ancylostoma ceylanicum
ANCCEY_10464
N
0.416
ANCDUO_11855
Ancylostoma duodenale
ANCDUO_11855
N
0.416
NBR_0001132501
Nippostrongylus brasiliensis
NBR_0001132501
N
0.416
NECAME_10840
Necator americanus
NECAME_10840
N
0.416
SVUK_0001398701
Strongylus vulgaris
SVUK_0001398701
N
0.416