CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ubtf.L
(
Xenopus laevis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
XB-GENE-6254049
T335098_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAA40487
Sox
112
180
PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKLEFERNLARFR
CAA40487
Sox
196
264
PEKPKTPQQLWYNHERKVYLKLHADASTKDVKDALGKQWSQLTDKKRLKWIHKALEQRKQYEGIMREYM
CAA40487
Sox
298
361
TKPPPNSYSMYCAELMANMKDVPSTERMVLCSQRWKLLSQKEKDAYNKKCEQRKKDYEVELMRF
CAA40487
Sox
425
467
DRAKALKSMEGTWLNMEKKEKIMWIKKAAEDQKRYERELSDMR
CAA40487
Sox
486
552
KKAPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWHRISPSQKDYYKKLAEDQQRVYRTQFDTWM
Links
Other
Sox
family TFs
Other
Xenopus laevis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_58881
Bipolaris maydis
COCC4DRAFT_58881
N
COCCADRAFT_91577
Bipolaris zeicola
COCCADRAFT_91577
N
COCSADRAFT_269643
Bipolaris sorokiniana
COCSADRAFT_269643
N
COCVIDRAFT_96697
Bipolaris victoriae
COCVIDRAFT_96697
N
PTRG_01509
Pyrenophora triticirepentis
PTRG_01509
N
PTT_20228
Pyrenophora teres
PTT_20228
N
SETTUDRAFT_18494
Setosphaeria turcica
SETTUDRAFT_18494
N