ubtf.L (Xenopus laevis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 XB-GENE-6254049 T335098_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CAA40487 Sox 112 180
CAA40487 Sox 196 264
CAA40487 Sox 298 361
CAA40487 Sox 425 467
CAA40487 Sox 486 552

Links

Other Sox family TFs
Other Xenopus laevis TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
1715211A Xenopus laevis 1715211A N 0.716
ENSXMAG00000012822 Xiphophorus maculatus ENSXMAG00000012822 N 0.555
ENSONIG00000014037 Oreochromis niloticus ENSONIG00000014037 N 0.549
ubtfl Tetraodon nigroviridis ENSTNIG00000003066 N 0.549
ubtfl Danio rerio ENSDARG00000038780 N 0.547
ubtfl Takifugu rubripes ENSTRUG00000009527 N 0.547
ubtfl Gasterosteus aculeatus ENSGACG00000001504 N 0.545
ENSGMOG00000009475 Gadus morhua ENSGMOG00000009475 N 0.539
ENSLACG00000008118 Latimeria chalumnae ENSLACG00000008118 N 0.473
ENSLOCG00000010224 Lepisosteus oculatus ENSLOCG00000010224 N 0.433