ubtfl (Tetraodon nigroviridis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSTNIG00000003066 T329240_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000005638 Sox 111 179
ENSTNIP00000005638 Sox 195 263
ENSTNIP00000005638 Sox 295 358
ENSTNIP00000005638 Sox 471 517
ENSTNIP00000005638 Sox 535 602

Links

Other Sox family TFs
Other Tetraodon nigroviridis TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ubtfl Takifugu rubripes ENSTRUG00000009527 N 0.740
ENSGMOG00000009475 Gadus morhua ENSGMOG00000009475 N 0.666
ENSONIG00000014037 Oreochromis niloticus ENSONIG00000014037 N 0.665
ubtfl Danio rerio ENSDARG00000038780 N 0.655
ENSXMAG00000012822 Xiphophorus maculatus ENSXMAG00000012822 N 0.655
ubtfl Gasterosteus aculeatus ENSGACG00000001504 N 0.648
ENSLACG00000008118 Latimeria chalumnae ENSLACG00000008118 N 0.578
ubtf.L Xenopus laevis XB-GENE-6254049 N 0.549
1715211A Xenopus laevis 1715211A N 0.545
ENSLOCG00000010224 Lepisosteus oculatus ENSLOCG00000010224 N 0.483