13606_Multiple (Saccharomyces paradoxus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 13606_Multiple T335134_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IXR1
M08429_2.00 		Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG		 ChIP-chip
Mathelier et al.(2014)
MA0323.1 		0.623 1.000
IXR1
M11345_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$IXR1_01 		0.623 1.000
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
13606_Multiple Sox 1 57
13606_Multiple Sox 62 128

Links

Other Sox family TFs
Other Saccharomyces paradoxus TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003861 Aedes aegypti AAEL003861 N
AAEL013830 Aedes aegypti AAEL013830 N
AALB000009 Anopheles albimanus AALB000009 N
AARA009523 Anopheles arabiensis AARA009523 N
AATE014935 Anopheles atroparvus AATE014935 N
ACHR009279 Anopheles christyi ACHR009279 N
ACOM040573 Anopheles coluzzii ACOM040573 N
ACUA000016 Anopheles culicifacies ACUA000016 N
ACYPI49959 Acyrthosiphon pisum ACYPI49959 N
ADAC010344 Anopheles darlingi ADAC010344 N
ADIR011406 Anopheles dirus ADIR011406 N
AEPI007740 Anopheles epiroticus AEPI007740 N
AFAF001139 Anopheles farauti AFAF001139 N
AFUN006562 Anopheles funestus AFUN006562 N
AGAP008959 Anopheles gambiae AGAP008959 N
AMAM022587 Anopheles maculatus AMAM022587 N
AMEC002045 Anopheles melas AMEC002045 N
AMIN009404 Anopheles minimus AMIN009404 N
AQUA002266 Anopheles quadriannulatus AQUA002266 N
ASIS009839 Anopheles sinensis ASIS009839 N
ASIS018274 Anopheles sinensis ASIS018274 N
ASTEI01951 Anopheles stephensi ASTEI01951 N
Cflo_04314--XP_623488.2_APIME Camponotus floridanus Cflo_04314--XP_623488.2_APIME N
chinmo Drosophila melanogaster FBgn0086758 N
chinmo Drosophila simulans FBgn0194496 N
CPIJ009317 Culex quinquefasciatus CPIJ009317 N
CpipJ_CPIJ009317 Culex pipiens CpipJ_CPIJ009317 N
GB51195 Apis mellifera GB51195 N
GF15850 Drosophila ananassae FBgn0092874 N
GG24800 Drosophila erecta FBgn0116930 N
GH11419 Drosophila grimshawi FBgn0118899 N
GI14585 Drosophila mojavensis FBgn0137336 N
GK15202 Drosophila willistoni FBgn0217207 N
HMEL015812 Heliconius melpomene HMEL015812 N
KGM_10128 Danaus plexippus KGM_10128 N
L798_02452 Zootermopsis nevadensis L798_02452 N
LCUP005584 Lucilia cuprina LCUP005584 N
LDEC003069 Leptinotarsa decemlineata LDEC003069 N
NV11135 Nasonia vitripennis NV11135 N
PHUM464690 Pediculus humanus PHUM464690 N
PPAI002026 Phlebotomus papatasi PPAI002026 N
TC013792 Tribolium castaneum TC013792 N
YQE_06249 Dendroctonus ponderosae YQE_06249 N