13606_Multiple (Saccharomyces paradoxus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 13606_Multiple T335134_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IXR1
M08429_2.00 		Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG		 ChIP-chip
Mathelier et al.(2014)
MA0323.1 		0.623 1.000
IXR1
M11345_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$IXR1_01 		0.623 1.000
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
13606_Multiple Sox 1 57
13606_Multiple Sox 62 128

Links

Other Sox family TFs
Other Saccharomyces paradoxus TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SU7_2018 Saccharomyces arboricola SU7_2018 I 0.623
IXR1 Saccharomyces cerevisiae YKL032C D 0.623
13553_YKL032C Saccharomyces mikatae 13553_YKL032C I 0.623
14658_YKL032C Saccharomyces bayanus 14658_YKL032C I 0.623
NDAI_0K01850 Naumovozyma dairenensis NDAI_0K01850 I 0.591
NCAS_0A04790 Naumovozyma castellii NCAS_0A04790 I 0.588
TDEL_0A03100 Torulaspora delbrueckii TDEL_0A03100 I 0.583
ZBAI_03824 Zygosaccharomyces bailii ZBAI_03824 I 0.583
ZBAI_09505 Zygosaccharomyces bailii ZBAI_09505 I 0.583
KNAG_0A07060 Kazachstania naganishii KNAG_0A07060 I 0.576
CAGL0L02013g Candida glabrata CAGL0L02013g I 0.575
ZYRO0B02068g Zygosaccharomyces rouxii ZYRO0B02068g I 0.570
KAFR_0J00330 Kazachstania africana KAFR_0J00330 I 0.567
Kpol_348p11 Vanderwaltozyma polyspora Kpol_348p11 I 0.563
TPHA_0G03540 Tetrapisispora phaffii TPHA_0G03540 I 0.563
TBLA_0G02260 Tetrapisispora blattae TBLA_0G02260 I 0.559
AACERI_AaceriAGL073CA Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL073CA I 0.521
AGOS_AGL073CA Ashbya gossypii AGOS_AGL073CA I 0.521
Ecym_7252 Eremothecium cymbalariae Ecym_7252 I 0.512
Kwal_8043 Kluyveromyces waltii Kwal_8043 I 0.501
KLTH0D06908g Lachancea thermotolerans KLTH0D06908g I 0.496
KLTH0D06908g Kluyveromyces thermotolerans KLTH0D06908g I 0.496
LALA0_S02e01376g Lachancea lanzarotensis LALA0_S02e01376g I 0.490
KLLA0_E18481g Kluyveromyces lactis KLLA0_E18481g I 0.462
SAKL0A09548g Lachancea kluyveri SAKL0A09548g I 0.449