CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KLTH0D06908g
(
Kluyveromyces thermotolerans
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
KLTH0D06908g
T335254_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IXR1
M08429_2.00
Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG
ChIP-chip
Mathelier et al.(2014)
MA0323.1
0.614
0.669
IXR1
M11345_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$IXR1_01
0.614
0.669
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KLTH0D06908g
Sox
229
297
PKRPSSAYFLFSMAVREDLVREYPDAKVPELSKLASAKWKEMSDEDKKPYHVKFKENWEKYRIARKEYE
KLTH0D06908g
Sox
302
368
PKRPSGPFIQFTQEVRPQIIRENPQKDLIEITKLIGEKWRSLSPVDKRTYTDTYKRKLKEWEEQYPE
Links
Other
Sox
family TFs
Other
Kluyveromyces thermotolerans
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KLTH0D06908g
Lachancea thermotolerans
KLTH0D06908g
I
0.741
Kwal_8043
Kluyveromyces waltii
Kwal_8043
I
0.733
LALA0_S02e01376g
Lachancea lanzarotensis
LALA0_S02e01376g
I
0.713
AACERI_AaceriAGL073CA
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAGL073CA
I
0.650
AGOS_AGL073CA
Ashbya gossypii
AGOS_AGL073CA
I
0.650
Ecym_7252
Eremothecium cymbalariae
Ecym_7252
I
0.649
KNAG_0A07060
Kazachstania naganishii
KNAG_0A07060
I
0.635
SAKL0A09548g
Lachancea kluyveri
SAKL0A09548g
I
0.635
ZBAI_03824
Zygosaccharomyces bailii
ZBAI_03824
I
0.633
ZBAI_09505
Zygosaccharomyces bailii
ZBAI_09505
I
0.633
TDEL_0A03100
Torulaspora delbrueckii
TDEL_0A03100
I
0.630
KAFR_0J00330
Kazachstania africana
KAFR_0J00330
I
0.629
NDAI_0K01850
Naumovozyma dairenensis
NDAI_0K01850
I
0.623
TBLA_0G02260
Tetrapisispora blattae
TBLA_0G02260
I
0.620
NCAS_0A04790
Naumovozyma castellii
NCAS_0A04790
I
0.619
SU7_2018
Saccharomyces arboricola
SU7_2018
I
0.614
IXR1
Saccharomyces cerevisiae
YKL032C
D
0.614
ZYRO0B02068g
Zygosaccharomyces rouxii
ZYRO0B02068g
I
0.614
13553_YKL032C
Saccharomyces mikatae
13553_YKL032C
I
0.614
14658_YKL032C
Saccharomyces bayanus
14658_YKL032C
I
0.614
CAGL0L02013g
Candida glabrata
CAGL0L02013g
I
0.598
Kpol_348p11
Vanderwaltozyma polyspora
Kpol_348p11
I
0.592
TPHA_0G03540
Tetrapisispora phaffii
TPHA_0G03540
I
0.592
KLLA0_E18481g
Kluyveromyces lactis
KLLA0_E18481g
I
0.574
13606_Multiple
Saccharomyces paradoxus
13606_Multiple
I
0.496