SAKL0A09548g (Lachancea kluyveri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SAKL0A09548g T335317_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IXR1
M08429_2.00 		Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG		 ChIP-chip
Mathelier et al.(2014)
MA0323.1 		0.566 0.703
IXR1
M11345_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$IXR1_01 		0.566 0.703
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SAKL0A09548g Sox 216 284
SAKL0A09548g Sox 289 357

Links

Other Sox family TFs
Other Lachancea kluyveri TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
KLTH0D06908g Lachancea thermotolerans KLTH0D06908g I 0.635
KLTH0D06908g Kluyveromyces thermotolerans KLTH0D06908g I 0.635
Kwal_8043 Kluyveromyces waltii Kwal_8043 I 0.634
LALA0_S02e01376g Lachancea lanzarotensis LALA0_S02e01376g I 0.630
AACERI_AaceriAGL073CA Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL073CA I 0.596
AGOS_AGL073CA Ashbya gossypii AGOS_AGL073CA I 0.596
Ecym_7252 Eremothecium cymbalariae Ecym_7252 I 0.595
KLLA0_E18481g Kluyveromyces lactis KLLA0_E18481g I 0.591
TDEL_0A03100 Torulaspora delbrueckii TDEL_0A03100 I 0.586
KNAG_0A07060 Kazachstania naganishii KNAG_0A07060 I 0.585
ZBAI_03824 Zygosaccharomyces bailii ZBAI_03824 I 0.583
ZBAI_09505 Zygosaccharomyces bailii ZBAI_09505 I 0.583
ZYRO0B02068g Zygosaccharomyces rouxii ZYRO0B02068g I 0.583
KAFR_0J00330 Kazachstania africana KAFR_0J00330 I 0.579
NDAI_0K01850 Naumovozyma dairenensis NDAI_0K01850 I 0.576
TBLA_0G02260 Tetrapisispora blattae TBLA_0G02260 I 0.571
Kpol_348p11 Vanderwaltozyma polyspora Kpol_348p11 I 0.569
NCAS_0A04790 Naumovozyma castellii NCAS_0A04790 I 0.569
TPHA_0G03540 Tetrapisispora phaffii TPHA_0G03540 I 0.569
CAGL0L02013g Candida glabrata CAGL0L02013g I 0.566
SU7_2018 Saccharomyces arboricola SU7_2018 I 0.566
IXR1 Saccharomyces cerevisiae YKL032C D 0.566
13553_YKL032C Saccharomyces mikatae 13553_YKL032C I 0.566
14658_YKL032C Saccharomyces bayanus 14658_YKL032C I 0.566
13606_Multiple Saccharomyces paradoxus 13606_Multiple I 0.449