Ecym_7252 (Eremothecium cymbalariae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Ecym_7252 T327413_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IXR1
M08429_2.00 		Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG		 ChIP-chip
Mathelier et al.(2014)
MA0323.1 		0.630 0.691
IXR1
M11345_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$IXR1_01 		0.630 0.691
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AET41096 Sox 295 363
AET41096 Sox 368 434

Links

Other Sox family TFs
Other Eremothecium cymbalariae TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AACERI_AaceriAGL073CA Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL073CA I 0.732
AGOS_AGL073CA Ashbya gossypii AGOS_AGL073CA I 0.732
KAFR_0J00330 Kazachstania africana KAFR_0J00330 I 0.655
KLTH0D06908g Lachancea thermotolerans KLTH0D06908g I 0.649
ZBAI_03824 Zygosaccharomyces bailii ZBAI_03824 I 0.649
ZBAI_09505 Zygosaccharomyces bailii ZBAI_09505 I 0.649
KLTH0D06908g Kluyveromyces thermotolerans KLTH0D06908g I 0.649
Kwal_8043 Kluyveromyces waltii Kwal_8043 I 0.648
KNAG_0A07060 Kazachstania naganishii KNAG_0A07060 I 0.646
TDEL_0A03100 Torulaspora delbrueckii TDEL_0A03100 I 0.646
TBLA_0G02260 Tetrapisispora blattae TBLA_0G02260 I 0.640
NDAI_0K01850 Naumovozyma dairenensis NDAI_0K01850 I 0.634
NCAS_0A04790 Naumovozyma castellii NCAS_0A04790 I 0.630
SU7_2018 Saccharomyces arboricola SU7_2018 I 0.630
IXR1 Saccharomyces cerevisiae YKL032C D 0.630
ZYRO0B02068g Zygosaccharomyces rouxii ZYRO0B02068g I 0.630
13553_YKL032C Saccharomyces mikatae 13553_YKL032C I 0.630
14658_YKL032C Saccharomyces bayanus 14658_YKL032C I 0.630
LALA0_S02e01376g Lachancea lanzarotensis LALA0_S02e01376g I 0.629
CAGL0L02013g Candida glabrata CAGL0L02013g I 0.621
KLLA0_E18481g Kluyveromyces lactis KLLA0_E18481g I 0.611
Kpol_348p11 Vanderwaltozyma polyspora Kpol_348p11 I 0.610
TPHA_0G03540 Tetrapisispora phaffii TPHA_0G03540 I 0.610
SAKL0A09548g Lachancea kluyveri SAKL0A09548g I 0.595
13606_Multiple Saccharomyces paradoxus 13606_Multiple I 0.512
TPHA_0C04200 Tetrapisispora phaffii TPHA_0C04200 N 0.415