CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshTM_pg.C_110237
(
Tremella mesenterica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
estExt_fgeneshTM_pg.C_110237
T335214_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshTM_pg.C_110237
Sox
135
203
PKRPPSAYIMFQNEVRDQMRKTNPEIAYKEVLGMISQKWKDLSDEQKRVYETEYAKQVNGYNTSAELYK
Links
Other
Sox
family TFs
Other
Tremella mesenterica
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm9858
Brugia malayi
Bm9858
N
0.000
GSTUM_00005106001
Tuber melanosporum
GSTUM_00005106001
N
0.000
LOAG_06904
Loa loa
LOAG_06904
N
0.000
nAv.1.0.1.g02807
Acanthocheilonema viteae
nAv.1.0.1.g02807
N
0.000
nDi.2.2.2.g08184
Dirofilaria immitis
nDi.2.2.2.g08184
N
0.000
nLs.2.1.2.g01322
Litomosoides sigmodontis
nLs.2.1.2.g01322
N
0.000
nOo.2.0.1.g04260
Onchocerca ochengi
nOo.2.0.1.g04260
N
0.000
TCLT_0000054001
Thelazia callipaeda
TCLT_0000054001
N
0.000
WBGene00246010
Onchocerca volvulus
WBGene00246010
N
0.000