CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AFAF004631
(
Anopheles farauti
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
AFAF004631
T335576_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AFAF004631-PA
Sox
70
138
PEKPLMPYMRYSRKVWDSIKASNSDLKLWEVGKIIGQQWRLLPDSEKEEYIAEYELEKAEHEKNMKAYH
Links
Other
Sox
family TFs
Other
Anopheles farauti
TFs
140 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g121020
Brassica oleracea
Bo2g121020
N
0.000
Bo5g065610
Brassica oleracea
Bo5g065610
N
0.000
Bostr.15697s0404
Boechera stricta
Bostr.15697s0404
N
0.000
Bra039880
Brassica rapa
Bra039880
N
0.000
Cagra.1508s0093
Capsella grandiflora
Cagra.1508s0093
N
0.000
GRMZM2G081812
Zea mays
GRMZM2G081812
N
0.000
maker-pag1_scaffold_112-snap-gene-0.15
Pythium aphanidermatum
maker-pag1_scaffold_112-snap-gene-0.15
N
0.000
Pavir.Ba01662
Panicum virgatum
Pavir.Ba01662
N
0.000
Pavir.J03264
Panicum virgatum
Pavir.J03264
N
0.000
PK05604.1
Cannabis sativa
PK05604.1
N
0.000
Sb02g032810
Sorghum bicolor
Sb02g032810
N
0.000
Si030356m.g
Setaria italica
Si030356m.g
N
0.000
Solyc02g032120.2
Solanum lycopersicum
Solyc02g032120.2
N
0.000
SUF4
Arabidopsis thaliana
AT1G30970
N
0.000
SUF4
Arabidopsis lyrata
fgenesh2_kg.1__3297__AT1G30970.1
N
0.000
Thhalv10008022m.g
Eutrema salsugineum
Thhalv10008022m.g
N
0.000