Cagra.1508s0093 (Capsella grandiflora)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cagra.1508s0093 T142646_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1508s0093.1.p C2H2 ZF 14 35
Cagra.1508s0093.1.p C2H2 ZF 36 59

Links

Other C2H2 ZF family TFs
Other Capsella grandiflora TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SUF4 Arabidopsis thaliana AT1G30970 N 0.827
Bo5g065610 Brassica oleracea Bo5g065610 N 0.827
Bra023153 Brassica rapa Bra023153 N 0.827
SUF4 Arabidopsis lyrata fgenesh2_kg.1__3297__AT1G30970.1 N 0.827
Bostr.15697s0404 Boechera stricta Bostr.15697s0404 N 0.827
Thhalv10008022m.g Eutrema salsugineum Thhalv10008022m.g N 0.827
Bo2g121020 Brassica oleracea Bo2g121020 N 0.821
Bra039880 Brassica rapa Bra039880 N 0.819
PK05604.1 Cannabis sativa PK05604.1 N 0.807
Solyc02g032120.2 Solanum lycopersicum Solyc02g032120.2 N 0.795
GRMZM2G081812 Zea mays GRMZM2G081812 N 0.784
Sb02g032810 Sorghum bicolor Sb02g032810 N 0.784
Si030356m.g Setaria italica Si030356m.g N 0.784
Pavir.Ba01662 Panicum virgatum Pavir.Ba01662 N 0.784
Pavir.J03264 Panicum virgatum Pavir.J03264 N 0.784
maker-pag1_scaffold_112-snap-gene-0.15 Pythium aphanidermatum maker-pag1_scaffold_112-snap-gene-0.15 N 0.768