AMEM006878 (Anopheles merus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 AMEM006878 T335682_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.425 0.377
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMEM006878-PA Sox 254 322

Links

Other Sox family TFs
Other Anopheles merus TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30136.m001048 Ricinus communis 30136.m001048 N 0.000
Aquca_022_00282 Aquilegia coerulea Aquca_022_00282 I 0.000
Bo3g101690 Brassica oleracea Bo3g101690 I 0.000
Bra024263 Brassica rapa Bra024263 I 0.000
BRADI2G24790 Brachypodium distachyon BRADI2G24790 N 0.000
cassava2513.valid.m1 Manihot esculenta cassava2513.valid.m1 I 0.000
cassava2514.valid.m1 Manihot esculenta cassava2514.valid.m1 I 0.000
cassava2515.valid.m1 Manihot esculenta cassava2515.valid.m1 I 0.000
cassava43226.valid.m1 Manihot esculenta cassava43226.valid.m1 N 0.000
cassava43227.valid.m1 Manihot esculenta cassava43227.valid.m1 N 0.000
Ciclev10001200m.g Citrus clementina Ciclev10001200m.g N 0.000
F775_32837 Aegilops tauschii F775_32837 N 0.000
GRMZM2G104400 Zea mays GRMZM2G104400 N 0.000
GSMUA_Achr11G09000_001 Musa acuminata GSMUA_Achr11G09000_001 N 0.000
GSMUA_Achr7G23330_001 Musa acuminata GSMUA_Achr7G23330_001 N 0.000
LjSGA_024981.1 Lotus japonicus LjSGA_024981.1 N 0.000
orange1.1g036240m.g Citrus sinensis orange1.1g036240m.g N 0.000
Pavir.J02083 Panicum virgatum Pavir.J02083 N 0.000
Pavir.J07259 Panicum virgatum Pavir.J07259 N 0.000
PDK_20s1369501g001 Phoenix dactylifera PDK_20s1369501g001 N 0.000
PGSC0003DMG400028662 Solanum tuberosum PGSC0003DMG400028662 N 0.000
Sb09g020880 Sorghum bicolor Sb09g020880 N 0.000
Si001354m.g Setaria italica Si001354m.g N 0.000
Thhalv10004501m.g Eutrema salsugineum Thhalv10004501m.g I 0.000
Traes_1AL_C4FA8404A Triticum aestivum Traes_1AL_C4FA8404A N 0.000
Traes_1BL_9018AA7BA Triticum aestivum Traes_1BL_9018AA7BA N 0.000
Traes_1DL_F410CF9FD Triticum aestivum Traes_1DL_F410CF9FD N 0.000
TRIUR3_22935 Triticum urartu TRIUR3_22935 N 0.000