CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DME_0000779601
(
Dracunculus medinensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
DME_0000779601
T336233_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DME_0000779601-mRNA-1
Sox
23
87
PKRAMSAFFFWMQENRERLKKPGMGVADVAKAAGLEWAQLADKSKWEKKASEDKKRYEKELAAYK
Links
Other
Sox
family TFs
Other
Dracunculus medinensis
TFs
211 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g120870
Brassica oleracea
Bo2g120870
N
Bra031820
Brassica rapa
Bra031820
N
evm.TU.supercontig_216.26
Carica papaya
evm.TU.supercontig_216.26
N
GLYMA01G27910
Glycine max
GLYMA01G27910
N
GLYMA10G02501
Glycine max
GLYMA10G02501
N
GSMUA_Achr7G24170_001
Musa acuminata
GSMUA_Achr7G24170_001
N
LPERR01G37530
Leersia perrieri
LPERR01G37530
N
MDP0000501042
Malus domestica
MDP0000501042
N
MDP0000844509
Malus domestica
MDP0000844509
N
mgf023939m
Mimulus guttatus
mgf023939m
N
OLONG_003514
Oryza longistaminata
OLONG_003514
N
OLONG_008057
Oryza longistaminata
OLONG_008057
N
OLONG_014599
Oryza longistaminata
OLONG_014599
N
OLONG_017398
Oryza longistaminata
OLONG_017398
N
OMERI01G40020
Oryza meridionalis
OMERI01G40020
N
Pavir.Ib03390
Panicum virgatum
Pavir.Ib03390
N
PDK_20s1331901g003
Phoenix dactylifera
PDK_20s1331901g003
N
SELMODRAFT_9104
Selaginella moellendorffii
SELMODRAFT_9104
N
SELMODRAFT_9108
Selaginella moellendorffii
SELMODRAFT_9108
N
SELMODRAFT_9114
Selaginella moellendorffii
SELMODRAFT_9114
N
TRAES3BF231500020CFD_g
Triticum aestivum
TRAES3BF231500020CFD_g
N
Traes_4BL_C7F1E5ECA
Triticum aestivum
Traes_4BL_C7F1E5ECA
N
TRIUR3_22849
Triticum urartu
TRIUR3_22849
N
TRIUR3_34542
Triticum urartu
TRIUR3_34542
N