CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L889_g13720
(
Steinernema feltiae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
L889_g13720
T336511_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L889_g13720.t1
Sox
566
632
PKKAQTSYFAWFTENRPTIRKEGDSVTETAKRAGQLWKEMNADDRAPYEERAKADKERYERELKEYQ
L889_g13720.t2
Sox
566
612
PKKAQTSYFAWFTENRPTIRKEGDSVTETAKRAGQLWKEMNADDRAV
Links
Other
Sox
family TFs
Other
Steinernema feltiae
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHLREDRAFT_116056
Chlamydomonas reinhardtii
CHLREDRAFT_116056
I
estExt_fgenesh4_pg.C_10375
Volvox carteri
estExt_fgenesh4_pg.C_10375
I
gw1.18.142.1
Volvox carteri
gw1.18.142.1
I