scaffold237-EXSNAP2012.36 (Pristionchus exspectatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 scaffold237-EXSNAP2012.36 T336903_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold237-EXSNAP2012.36 Sox 27 95

Links

Other Sox family TFs
Other Pristionchus exspectatus TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30128.m008807 Ricinus communis 30128.m008807 N 0.000
AMTR_s00057p00206860 Amborella trichopoda AMTR_s00057p00206860 N 0.000
Aquca_016_00289 Aquilegia coerulea Aquca_016_00289 N 0.000
AT1G09060 Arabidopsis thaliana AT1G09060 N 0.000
Bo8g058150 Brassica oleracea Bo8g058150 N 0.000
Bostr.25219s0040 Boechera stricta Bostr.25219s0040 N 0.000
Bra030754 Brassica rapa Bra030754 N 0.000
BRADI1G62640 Brachypodium distachyon BRADI1G62640 N 0.000
Cagra.4395s0091 Capsella grandiflora Cagra.4395s0091 N 0.000
Carubv10011895m.g Capsella rubella Carubv10011895m.g N 0.000
cassava22130.valid.m1 Manihot esculenta cassava22130.valid.m1 N 0.000
Ca_03676 Cicer arietinum Ca_03676 N 0.000
chr5.CM0299.460.nd Lotus japonicus chr5.CM0299.460.nd N 0.000
Ciclev10000178m.g Citrus clementina Ciclev10000178m.g N 0.000
Cucsa.091190 Cucumis sativus Cucsa.091190 N 0.000
Eucgr.B01932 Eucalyptus grandis Eucgr.B01932 N 0.000
evm.TU.supercontig_48.77 Carica papaya evm.TU.supercontig_48.77 N 0.000
F775_27911 Aegilops tauschii F775_27911 N 0.000
fgenesh2_kg.1__941__AT1G09060.2 Arabidopsis lyrata fgenesh2_kg.1__941__AT1G09060.2 N 0.000
gene22503-v1.0-hybrid Fragaria vesca gene22503-v1.0-hybrid N 0.000
GLYMA10G29371 Glycine max GLYMA10G29371 N 0.000
GLYMA20G37910 Glycine max GLYMA20G37910 N 0.000
Gorai.004G240400 Gossypium raimondii Gorai.004G240400 N 0.000
GRMZM2G428933 Zea mays GRMZM2G428933 N 0.000
LPERR03G14970 Leersia perrieri LPERR03G14970 N 0.000
Lus10017092.g Linum usitatissimum Lus10017092.g N 0.000
Lus10037812.g Linum usitatissimum Lus10037812.g N 0.000
mgf016253m Mimulus guttatus mgf016253m N 0.000
MLOC_15207 Hordeum vulgare MLOC_15207 N 0.000
MTR_1g083120 Medicago truncatula MTR_1g083120 N 0.000
OGLUM03G17600 Oryza glumaepatula OGLUM03G17600 N 0.000
OMERI03G15300 Oryza meridionalis OMERI03G15300 N 0.000
ONIVA03G18210 Oryza nivara ONIVA03G18210 N 0.000
orange1.1g002177m.g Citrus sinensis orange1.1g002177m.g N 0.000
ORGLA03G0163900 Oryza glaberrima ORGLA03G0163900 N 0.000
OS03G0346700 Oryza sativa OS03G0346700 N 0.000
Pavir.J33002 Panicum virgatum Pavir.J33002 N 0.000
PDK_20s1361681g001 Phoenix dactylifera PDK_20s1361681g001 N 0.000
PGSC0003DMG400022424 Solanum tuberosum PGSC0003DMG400022424 N 0.000
PK22697.1 Cannabis sativa PK22697.1 N 0.000
Pm003293 Prunus mume Pm003293 N 0.000
POPTR_0005s02710 Populus trichocarpa POPTR_0005s02710 N 0.000
POPTR_0013s01970 Populus trichocarpa POPTR_0013s01970 N 0.000
PRUPE_ppa020523mg Prunus persica PRUPE_ppa020523mg N 0.000
SapurV1A.0066s0380 Salix purpurea SapurV1A.0066s0380 N 0.000
SapurV1A.0424s0260 Salix purpurea SapurV1A.0424s0260 N 0.000
Sb01g035540 Sorghum bicolor Sb01g035540 N 0.000
Si034162m.g Setaria italica Si034162m.g N 0.000
Solyc02g078790.2 Solanum lycopersicum Solyc02g078790.2 N 0.000
TCM_026634 Theobroma cacao TCM_026634 N 0.000
Thhalv10006723m.g Eutrema salsugineum Thhalv10006723m.g N 0.000
Traes_4AS_93108583B Triticum aestivum Traes_4AS_93108583B N 0.000
Traes_4BS_BDBC1B1FA Triticum aestivum Traes_4BS_BDBC1B1FA N 0.000
Traes_4DL_E88B8B0F6 Triticum aestivum Traes_4DL_E88B8B0F6 N 0.000
TRIUR3_21153 Triticum urartu TRIUR3_21153 N 0.000
VIT_14s0060g02420 Vitis vinifera VIT_14s0060g02420 N 0.000