CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TsM_000313900
(
Taenia solium
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
TsM_000313900
T337226_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TsM_000313900
Sox
40
103
TKRPPGPYALFLQSMKSCYSGDLAAFSRLVAGKWRHLDAKQKAVYEKRAQYLKAKYHSPCKNSA
TsM_000313900
Sox
100
142
KNSACSKYLTFVNSAYRCLRQQHPDWSSKRIRDAVMQSYRGKQ
Links
Other
Sox
family TFs
Other
Taenia solium
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BX914205.2
Danio rerio
ENSDARG00000099590
N
CR352209.1
Danio rerio
ENSDARG00000103972
N
ECPE_0000661901
Echinostoma caproni
ECPE_0000661901
N
ENSGACG00000014232
Gasterosteus aculeatus
ENSGACG00000014232
N
ENSGACG00000018423
Gasterosteus aculeatus
ENSGACG00000018423
N
ENSONIG00000000463
Oreochromis niloticus
ENSONIG00000000463
N
ENSONIG00000000797
Oreochromis niloticus
ENSONIG00000000797
N
ENSONIG00000007925
Oreochromis niloticus
ENSONIG00000007925
N
ENSONIG00000009268
Oreochromis niloticus
ENSONIG00000009268
N
ENSONIG00000010899
Oreochromis niloticus
ENSONIG00000010899
N
ENSONIG00000017354
Oreochromis niloticus
ENSONIG00000017354
N
ENSXMAG00000010532
Xiphophorus maculatus
ENSXMAG00000010532
N
FO834888.2
Danio rerio
ENSDARG00000101994
N
SMU15019363
Schmidtea mediterranea
SMU15019363
N
SMU15036424
Schmidtea mediterranea
SMU15036424
N
XP_002935373
Xenopus tropicalis
XP_002935373
N