tbp (Takifugu rubripes)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 ENSTRUG00000007200 T342443_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.994 0.994
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.994 0.994
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.994 0.994
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.994 0.994
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.994 0.994
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.994 0.994
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.994 0.994
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.994 0.994
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.994 0.994
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.994 0.994
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.802 0.802
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.802 0.802
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000017711 TBP 144 226
ENSTRUP00000017711 TBP 234 317

Links

Other TBP family TFs
Other Takifugu rubripes TFs

758 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP16128 Atta cephalotes ACEP16128 N
Alligator_sinensis_CCG010046.1 Alligator sinensis Alligator_sinensis_CCG010046.1 N
ANCCAN_04327 Ancylostoma caninum ANCCAN_04327 N
ANCCEY_00583 Ancylostoma ceylanicum ANCCEY_00583 N
CGOC_0001264301 Cylicostephanus goldi CGOC_0001264301 N
DICVIV_10715 Dictyocaulus viviparus DICVIV_10715 N
ECPE_0000395601 Echinostoma caproni ECPE_0000395601 N
ENSOANG00000029773 Ornithorhynchus anatinus ENSOANG00000029773 I
L596_g4935 Steinernema carpocapsae L596_g4935 N
L892_g21790 Steinernema scapterisci L892_g21790 N
NBR_0000542501 Nippostrongylus brasiliensis NBR_0000542501 N
NBR_0001177301 Nippostrongylus brasiliensis NBR_0001177301 N
NBR_0002182001 Nippostrongylus brasiliensis NBR_0002182001 N
NECAME_19347 Necator americanus NECAME_19347 N
PPA14512 Pristionchus pacificus PPA14512 N
SMTD_0001779301 Schistosoma mattheei SMTD_0001779301 N
SMUV_0000075501 Syphacia muris SMUV_0000075501 N
SPER_0002063901 Spirometra erinaceieuropaei SPER_0002063901 N
SPER_0003769001 Spirometra erinaceieuropaei SPER_0003769001 N
SPER_0003779701 Spirometra erinaceieuropaei SPER_0003779701 N
SVUK_0001851801 Strongylus vulgaris SVUK_0001851801 N
TBX15 Bos taurus ENSBTAG00000007767 I