HMPREF1541_03377 (Cyphellophora europaea)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 HMPREF1541_03377 T342628_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.910 0.910
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.910 0.910
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.910 0.910
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.820 0.820
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.820 0.820
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.820 0.820
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.820 0.820
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.820 0.820
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.820 0.820
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.820 0.820
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.820 0.820
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.820 0.820
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.820 0.820
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ETN41441 TBP 80 162
ETN41441 TBP 170 253

Links

Other TBP family TFs
Other Cyphellophora europaea TFs

765 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G72300 Brachypodium distachyon BRADI1G72300 N
F775_00997 Aegilops tauschii F775_00997 N
F775_04932 Aegilops tauschii F775_04932 N
F775_29040 Aegilops tauschii F775_29040 I
GRMZM2G111306 Zea mays GRMZM2G111306 I
MLOC_16598 Hordeum vulgare MLOC_16598 I
MLOC_54039 Hordeum vulgare MLOC_54039 I
Pavir.Da02101 Panicum virgatum Pavir.Da02101 I
Pavir.J01189 Panicum virgatum Pavir.J01189 I
Q8RUX5_MAIZE Zea mays Q8RUX5_MAIZE D
Sb09g003390 Sorghum bicolor Sb09g003390 I
Si007889m.g Setaria italica Si007889m.g I
Si032375m.g Setaria italica Si032375m.g N
Traes_7BS_62FDC3C38 Triticum aestivum Traes_7BS_62FDC3C38 I
TRIUR3_31684 Triticum urartu TRIUR3_31684 I