PV08_11625 (Exophiala spinifera)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 PV08_11625 T342854_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.910 0.910
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.910 0.910
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.910 0.910
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.825 0.825
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.825 0.825
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.825 0.825
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.825 0.825
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.825 0.825
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.825 0.825
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.825 0.825
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.825 0.825
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.825 0.825
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.825 0.825
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIW10661 TBP 82 164
KIW10661 TBP 172 254

Links

Other TBP family TFs
Other Exophiala spinifera TFs

768 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_004_00804 Aquilegia coerulea Aquca_004_00804 N
AT3G54390 Arabidopsis thaliana AT3G54390 N
Bo8g083630 Brassica oleracea Bo8g083630 N
Bostr.0697s0050 Boechera stricta Bostr.0697s0050 N
Bra007069 Brassica rapa Bra007069 N
Cagra.0562s0030 Capsella grandiflora Cagra.0562s0030 N
Carubv10019255m.g Capsella rubella Carubv10019255m.g N
cassava22232.valid.m1 Manihot esculenta cassava22232.valid.m1 N
Ciclev10001759m.g Citrus clementina Ciclev10001759m.g N
Cla010096 Citrullus lanatus Cla010096 N
fgenesh2_kg.5__1832__AT3G54390.1 Arabidopsis lyrata fgenesh2_kg.5__1832__AT3G54390.1 N
GLYMA11G25570 Glycine max GLYMA11G25570 N
GLYMA13G26550 Glycine max GLYMA13G26550 N
GLYMA15G37451 Glycine max GLYMA15G37451 N
LjSGA_030847.2 Lotus japonicus LjSGA_030847.2 N
MDP0000123719 Malus domestica MDP0000123719 N
MDP0000727700 Malus domestica MDP0000727700 N
Pm016744 Prunus mume Pm016744 N
POPTR_0001s06580 Populus trichocarpa POPTR_0001s06580 N
POPTR_0003s19470 Populus trichocarpa POPTR_0003s19470 N
PRUPE_ppa007968mg Prunus persica PRUPE_ppa007968mg N
SapurV1A.0009s1160 Salix purpurea SapurV1A.0009s1160 N
SapurV1A.0574s0200 Salix purpurea SapurV1A.0574s0200 N
Solyc01g096470.2 Solanum lycopersicum Solyc01g096470.2 N
VIT_13s0084g00800 Vitis vinifera VIT_13s0084g00800 N