SU7_0942 (Saccharomyces arboricola)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 SU7_0942 T342920_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.994 0.994
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.994 0.994
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.994 0.994
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.802 0.802
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.802 0.802
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.802 0.802
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.802 0.802
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.802 0.802
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.802 0.802
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.802 0.802
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.802 0.802
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.802 0.802
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJS43965 TBP 64 146
EJS43965 TBP 154 237

Links

Other TBP family TFs
Other Saccharomyces arboricola TFs

781 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_004010 Albugo laibachii ALNC14_004010 N
ALNC14_053070 Albugo laibachii ALNC14_053070 N
CMT597C Cyanidioschyzon merolae CMT597C N
estExt_fgenesh1_kg.C_170233 Phytophthora capsici estExt_fgenesh1_kg.C_170233 N
F443_15755 Phytophthora parasitica F443_15755 N
fgenesh_scip_prom.28083.10203 Phytophthora lateralis fgenesh_scip_prom.28083.10203 N
fgenesh_scip_prom.46568.3463 Phytophthora kernoviae fgenesh_scip_prom.46568.3463 N
HpaG803356 Hyaloperonospora arabidopsidis HpaG803356 N
maker-pir_contig_314-fgenesh-gene-0.8 Pythium irregulare maker-pir_contig_314-fgenesh-gene-0.8 N
maker-piw_contig_1230-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_1230-fgenesh-gene-0.2 N
maker-pve_contig_1180-snap-gene-0.4 Pythium vexans maker-pve_contig_1180-snap-gene-0.4 N
Phyra75445 Phytophthora ramorum Phyra75445 N
Physo142181 Phytophthora sojae Physo142181 N
PITG_04701 Phytophthora infestans PITG_04701 N
snap_masked-pag1_scaffold_539-abinit-gene-0.22 Pythium aphanidermatum snap_masked-pag1_scaffold_539-abinit-gene-0.22 N
Thaps22124 Thalassiosira pseudonana Thaps22124 N
Thaps24112 Thalassiosira pseudonana Thaps24112 N
Thaps269474 Thalassiosira pseudonana Thaps269474 N