VDAG_01612 (Verticillium dahliae)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 VDAG_01612 T342992_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.910 0.910
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.910 0.910
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.910 0.910
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.820 0.820
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.820 0.820
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.820 0.820
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.820 0.820
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.820 0.820
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.820 0.820
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.820 0.820
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.820 0.820
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.820 0.820
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.820 0.820
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGY17930 TBP 73 155
EGY17930 TBP 163 246

Links

Other TBP family TFs
Other Verticillium dahliae TFs

759 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R006616 Calypte anna Aan_R006616 I
Afo_R014628 Aptenodytes forsteri Afo_R014628 I
Alligator_sinensis_CCG012951.1 Alligator sinensis Alligator_sinensis_CCG012951.1 I
B5DE03 Xenopus tropicalis B5DE03 I
B7ZSG3 Xenopus laevis B7ZSG3 I
ENSACAG00000002480 Anolis carolinensis ENSACAG00000002480 I
ENSAMEG00000006957 Ailuropoda melanoleuca ENSAMEG00000006957 I
ENSAMXG00000013017 Astyanax mexicanus ENSAMXG00000013017 I
ENSAPLG00000005775 Anas platyrhynchos ENSAPLG00000005775 I
ENSCSAG00000005257 Chlorocebus sabaeus ENSCSAG00000005257 I
ENSECAG00000022308 Equus caballus ENSECAG00000022308 I
ENSEEUG00000007221 Erinaceus europaeus ENSEEUG00000007221 I
ENSFALG00000010820 Ficedula albicollis ENSFALG00000010820 I
ENSGMOG00000012296 Gadus morhua ENSGMOG00000012296 I
ENSLACG00000016378 Latimeria chalumnae ENSLACG00000016378 I
ENSLOCG00000004537 Lepisosteus oculatus ENSLOCG00000004537 I
ENSMGAG00000001489 Meleagris gallopavo ENSMGAG00000001489 I
ENSMPUG00000011307 Mustela putorius furo ENSMPUG00000011307 I
ENSNLEG00000017890 Nomascus leucogenys ENSNLEG00000017890 I
ENSOANG00000015147 Ornithorhynchus anatinus ENSOANG00000015147 I
ENSOARG00000016334 Ovis aries ENSOARG00000016334 I
ENSONIG00000005545 Oreochromis niloticus ENSONIG00000005545 I
ENSONIG00000011043 Oreochromis niloticus ENSONIG00000011043 I
ENSOPRG00000015709 Ochotona princeps ENSOPRG00000015709 I
ENSP00000331327 Macaca fascicularis ENSP00000331327 I
ENSP00000331327-D1 Bos grunniens ENSP00000331327-D1 I
ENSPANG00000019482 Papio anubis ENSPANG00000019482 I
ENSPFOG00000010572 Poecilia formosa ENSPFOG00000010572 I
ENSPFOG00000017089 Poecilia formosa ENSPFOG00000017089 N
ENSPMAG00000008950 Petromyzon marinus ENSPMAG00000008950 I
ENSPPYG00000029822 Pongo abelii ENSPPYG00000029822 I
ENSPSIG00000013679 Pelodiscus sinensis ENSPSIG00000013679 I
ENSSARG00000000207 Sorex araneus ENSSARG00000000207 I
ENSSHAG00000017390 Sarcophilus harrisii ENSSHAG00000017390 I
ENSSTOG00000023716 Ictidomys tridecemlineatus ENSSTOG00000023716 I
ENSVPAG00000007788 Vicugna pacos ENSVPAG00000007788 I
ENSXMAG00000005139 Xiphophorus maculatus ENSXMAG00000005139 I
fgenesh2_pg.scaffold_80000039 Branchiostoma floridae fgenesh2_pg.scaffold_80000039 I
fgenesh2_pm.scaffold_110000013 Branchiostoma floridae fgenesh2_pm.scaffold_110000013 I
Gfo_R001970 Geospiza fortis Gfo_R001970 I
Pvit_09510 Pogona vitticeps Pvit_09510 I
WT1 Taeniopygia guttata ENSTGUG00000004906 I
Wt1 Rattus norvegicus ENSRNOG00000013074 I
WT1 Sus scrofa ENSSSCG00000013316 I
WT1 Loxodonta africana ENSLAFG00000006160 I
WT1 Callithrix jacchus ENSCJAG00000005900 I
WT1 Choloepus hoffmanni ENSCHOG00000006244 I
WT1 Canis familiaris ENSCAFG00000007426 I
WT1 Bos taurus ENSBTAG00000047268 I
wt1 Xenopus tropicalis XB-GENE-484999 I
WT1 Procavia capensis ENSPCAG00000002213 I
WT1 Gorilla gorilla ENSGGOG00000011586 I
WT1 Gallus gallus ENSGALG00000012115 I
WT1 Microcebus murinus ENSMICG00000004097 I
WT1 Myotis lucifugus ENSMLUG00000027523 I
WT1 Macaca mulatta ENSMMUG00000009881 I
WT1 Monodelphis domestica ENSMODG00000009646 I
WT1 Homo sapiens ENSG00000184937 D
Wt1 Mus musculus ENSMUSG00000016458 D
WT1 Felis catus ENSFCAG00000000308 I
WT1 Echinops telfairi ENSETEG00000000684 I
Wt1 Dipodomys ordii ENSDORG00000013725 I
WT1 Oryctolagus cuniculus ENSOCUG00000005882 I
WT1 Otolemur garnettii ENSOGAG00000007118 I
WT1 Dasypus novemcinctus ENSDNOG00000003652 I
wt1 Oryzias latipes ENSORLG00000009859 I
wt1 Oryzias latipes ENSORLG00000012424 I
WT1 Pan troglodytes ENSPTRG00000003476 I
wt1.L Xenopus laevis XB-GENE-6252376 I
wt1.S Xenopus laevis XB-GENE-864792 I
wt1b Danio rerio ENSDARG00000007990 I
wt1b Takifugu rubripes ENSTRUG00000006559 I
wt1b Tetraodon nigroviridis ENSTNIG00000013806 I
wt1b Gasterosteus aculeatus ENSGACG00000016020 I