GSMUA_Achr3G31370_001 (Musa acuminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GSMUA_Achr3G31370_001 T343963_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.940 0.466
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.940 0.466
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.940 0.466
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.939 0.458
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.936 0.450
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.931 0.489
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.903 0.420
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.877 0.359
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.873 0.351
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.873 0.351
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.849 0.336
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.849 0.328
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.833 0.336
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.833 0.336
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P31370_001 TCP 34 189

Links

Other TCP family TFs
Other Musa acuminata TFs

420 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo3g141480 Brassica oleracea Bo3g141480 I
Bo5g051970 Brassica oleracea Bo5g051970 I
Bo5g051980 Brassica oleracea Bo5g051980 I
Bo7g049940 Brassica oleracea Bo7g049940 I
Bo7g049950 Brassica oleracea Bo7g049950 I
Bostr.15697s0062 Boechera stricta Bostr.15697s0062 I
Bostr.15697s0063 Boechera stricta Bostr.15697s0063 I
Bra010949 Brassica rapa Bra010949 I
Bra030040 Brassica rapa Bra030040 I
Bra030041 Brassica rapa Bra030041 I
Bra032822 Brassica rapa Bra032822 I
Bra032823 Brassica rapa Bra032823 I
Cagra.8874s0007 Capsella grandiflora Cagra.8874s0007 I
Cagra.8874s0008 Capsella grandiflora Cagra.8874s0008 I
Carubv10009364m.g Capsella rubella Carubv10009364m.g I
Carubv10009367m.g Capsella rubella Carubv10009367m.g I
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N
Ca_08506 Cicer arietinum Ca_08506 I
SapurV1A.0001s2320 Salix purpurea SapurV1A.0001s2320 N
SPL10 Arabidopsis thaliana AT1G27370 D
SPL10 Arabidopsis lyrata fgenesh2_kg.1__2893__AT1G27370.2 I
SPL11 Arabidopsis lyrata scaffold_103051.1 I
SPL11 Arabidopsis thaliana AT1G27360 D
Thhalv10007832m.g Eutrema salsugineum Thhalv10007832m.g I
Thhalv10007882m.g Eutrema salsugineum Thhalv10007882m.g I