Cucsa.166230 (Cucumis sativus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Cucsa.166230 T344640_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP7
M07294_2.00 		Arabidopsis thaliana
RTGGGNCCCAC
GTGGGNCCCAY		 Dap-seq
OMalley et al.(2016)
TCP7_col_a 		0.967 0.867
TCP21
M07292_2.00 		Arabidopsis thaliana
NNRTGGGDCCCACN
NGTGGGHCCCAYNN		 Dap-seq
OMalley et al.(2016)
At5g08330_col_a 		0.967 0.843
TCP21
M07293_2.00 		Arabidopsis thaliana
RTRGGDCCCACH
DGTGGGHCCYAY		 Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a 		0.967 0.843
TCP19
M02504_2.00 		Arabidopsis thaliana
NNGGVCCCAC
GTGGGBCCNN		 PBM
Weirauch et al.(2014)
pTH7452 		0.965 0.675
TCP23
M00891_2.00 		Arabidopsis thaliana
NNGGKCCCAC
GTGGGMCCNN		 PBM
Franco-Zorrilla et al.(2014)
TCP23 		0.956 0.759
PCF2
M11399_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF2_01 		0.955 0.663
LjSGA_053525.1
M02518_2.00 		Lotus japonicus
GGNCCCAC
GTGGGNCC		 PBM
Weirauch et al.(2014)
pTH9201 		0.954 0.663
TCP14
M07289_2.00 		Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC
GTGGGHCCCACVHBMTHTBT		 Dap-seq
OMalley et al.(2016)
TCP14_col_b 		0.954 0.759
PK12736.1
M01315_2.00 		Cannabis sativa
NRRSCMYAYNNNNN
NNNNNRTRKGSYYN		 PBM
Lambert et al.(2019)
pTH10121 		0.954 0.747
TCP22
M07279_2.00 		Arabidopsis thaliana
RTRGGNCCCACHN
NDGTGGGNCCYAY		 Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a 		0.954 0.759
TCP22
M07280_2.00 		Arabidopsis thaliana
RTGGGDCCCACNN
NNGTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
At1g72010_col 		0.954 0.759
OsI_08196
M02513_2.00 		Oryza sativa
GGGCCCAC
GTGGGCCC		 PBM
Weirauch et al.(2014)
pTH9274 		0.953 0.711
OS02G0635800
M02512_2.00 		Oryza sativa
NBGGGCCCVN
NBGGGCCCVN		 PBM
Weirauch et al.(2014)
pTH8856 		0.953 0.723
TCP20
M02502_2.00 		Arabidopsis thaliana
GGSCCCACNN
NNGTGGGSCC		 PBM
Weirauch et al.(2014)
pTH8159 		0.951 0.651
TCP20
M07285_2.00 		Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC
GTGGGYCCCACNNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
TCP20_col_a 		0.951 0.651
TCP20
M07286_2.00 		Arabidopsis thaliana
RTGGGDCCCACH
DGTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
TCP20_colamp_a 		0.951 0.651
TCP20
M11397_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP20_01 		0.951 0.651
TCP15
M00892_2.00 		Arabidopsis thaliana
NNGGNCCCAC
GTGGGNCCNN		 PBM
Franco-Zorrilla et al.(2014)
TCP15 		0.950 0.723
TCP15
M07277_2.00 		Arabidopsis thaliana
RTRGGDCCCACHH
DDGTGGGHCCYAY		 Dap-seq
OMalley et al.(2016)
At1g69690_col_a 		0.950 0.723
TCP15
M07278_2.00 		Arabidopsis thaliana
RTRGGNCCCACHW
WDGTGGGNCCYAY		 Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a 		0.950 0.723
TCP15
M11394_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP15_01 		0.950 0.723
AT-TCP20
M02507_2.00 		Arabidopsis lyrata
GRSCCCAC
GTGGGSYC		 PBM
Weirauch et al.(2014)
pTH9229 		0.950 0.651
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00 		Arabidopsis lyrata
GRSCCCAC
GTGGGSYC		 PBM
Weirauch et al.(2014)
pTH9232 		0.946 0.651
TCP8
M01311_2.00 		Arabidopsis thaliana
NGGNMCCAC
GTGGKNCCN		 PBM
Lambert et al.(2019)
pTH11569 		0.945 0.747
cassava45561.m1
M02516_2.00 		Manihot esculenta
KGGVCCCACH
DGTGGGBCCM		 PBM
Weirauch et al.(2014)
pTH9207 		0.944 0.699
PK14653.1
M01317_2.00 		Cannabis sativa
BGGSCCCAC
GTGGGSCCV		 PBM
Lambert et al.(2019)
pTH11324 		0.941 0.639
PK14653.1
M02517_2.00 		Cannabis sativa
BTGGGCCCAV
BTGGGCCCAV		 PBM
Weirauch et al.(2014)
pTH9586 		0.941 0.639
VIT_15s0048g01150
M02515_2.00 		Vitis vinifera
NNGGNCCCAC
GTGGGNCCNN		 PBM
Weirauch et al.(2014)
pTH9294 		0.938 0.651
GLYMA19G26560
M02511_2.00 		Glycine max
BGGBCCCAC
GTGGGVCCV		 PBM
Weirauch et al.(2014)
pTH9184 		0.936 0.687
TCP9
M01086_2.00 		Arabidopsis thaliana
NNGGGCCCACN
NGTGGGCCCNN		 PBM
Sullivan et al.(2014)
pTH9796 		0.934 0.639
TCP9
M07281_2.00 		Arabidopsis thaliana
RTGGGDCCCAC
GTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a 		0.934 0.639
TCP9
M07282_2.00 		Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN
NVNHNHNHHGTGGGYCCCACH		 Dap-seq
OMalley et al.(2016)
At2g45680_col_b 		0.934 0.639
PK13314.1
M01316_2.00 		Cannabis sativa
NNGGNCCCAC
GTGGGNCCNN		 PBM
Lambert et al.(2019)
pTH11330 		0.934 0.663
TCP11
M11395_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP11_01 		0.852 0.542
TCP11
M11396_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP11_02 		0.852 0.542
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.166230.1 TCP 34 162

Links

Other TCP family TFs
Other Cucumis sativus TFs

662 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O7_09144 Cladophialophora yegresii A1O7_09144 I
AB04837.1 Alternaria brassicicola AB04837.1 I
ACLA_068510 Aspergillus clavatus CADACLAG00006604 I
AFUA_2G05830 Aspergillus fumigatus CADAFUAG00003580 I
AGABI2DRAFT_221018 Agaricus bisporus AGABI2DRAFT_221018 I
AMAG_10934 Allomyces macrogynus AMAG_10934 I
AMAG_11531 Allomyces macrogynus AMAG_11531 I
ANIA_07468 Aspergillus nidulans CADANIAG00000561 I
ATEG_06774 Aspergillus terreus CADATEAG00009372 I
BBA_03658 Beauveria bassiana BBA_03658 I
Bcin16g00520 Botrytis cinerea Bcin16g00520 I
BGHDH14_bgh02277 Blumeria graminis BGHDH14_bgh02277 I
BN946_scf184656.g9 Trametes cinnabarina BN946_scf184656.g9 I
CADANGAG00002975 Aspergillus niger CADANGAG00002975 I
CC1G_03210 Coprinopsis cinerea CC1G_03210 I
CCM_09384 Cordyceps militaris CCM_09384 I
CERSUDRAFT_154783 Ceriporiopsis subvermispora CERSUDRAFT_154783 I
CFIO01_13270 Colletotrichum fioriniae CFIO01_13270 I
CGGC5_5160 Colletotrichum gloeosporioides CGGC5_5160 I
CH063_04254 Colletotrichum higginsianum CH063_04254 I
CHGG_09150 Chaetomium globosum CHGG_09150 I
Cob_11782 Colletotrichum orbiculare Cob_11782 I
COCMIDRAFT_34032 Bipolaris oryzae COCMIDRAFT_34032 I
COCSADRAFT_324130 Bipolaris sorokiniana COCSADRAFT_324130 I
CSUB01_01974 Colletotrichum sublineola CSUB01_01974 I
CY34DRAFT_590075 Suillus luteus CY34DRAFT_590075 I
DACRYDRAFT_20822 Dacryopinax sp DACRYDRAFT_20822 I
estExt_fgeneshMC_kg.C_60018 Mucor circinelloides estExt_fgeneshMC_kg.C_60018 I
estExt_fgeneshPB_pg.C_60303 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_60303 N
estExt_Genewise1.C_90411 Cryphonectria parasitica estExt_Genewise1.C_90411 I
estExt_Genewise1.C_sca_2_chr3_3_00763 Nectria haematococca estExt_Genewise1.C_sca_2_chr3_3_00763 I
EURHEDRAFT_378858 Aspergillus ruber EURHEDRAFT_378858 I
F503_01793 Ophiostoma piceae uamh F503_01793 I
FFUJ_06134 Fusarium fujikuroi FFUJ_06134 I
fgenesh1_pm.00082_#_96 Aspergillus carbonarius fgenesh1_pm.00082_#_96 I
fgeneshMC_pm.9_#_186 Mucor circinelloides fgeneshMC_pm.9_#_186 I
fgeneshPB_pg.22__185 Phycomyces blakesleeanus fgeneshPB_pg.22__185 I
fgeneshPB_pg.2__402 Phycomyces blakesleeanus fgeneshPB_pg.2__402 I
FGRRES_08626 Fusarium graminearum FGRRES_08626 I
FOXG_03173 Fusarium oxysporum FOXG_03173 I
FPSE_06035 Fusarium pseudograminearum FPSE_06035 I
FVEG_02042 Fusarium verticillioides FVEG_02042 I
G647_09092 Cladophialophora carrionii G647_09092 I
GALMADRAFT_535775 Galerina marginata GALMADRAFT_535775 I
GLOINDRAFT_38994 Rhizophagus irregularis GLOINDRAFT_38994 I
GLRG_05382 Colletotrichum graminicola GLRG_05382 I
GMDG_01985 Pseudogymnoascus destructans GMDG_01985 I
HMPREF1541_06157 Cyphellophora europaea HMPREF1541_06157 I
K443DRAFT_671242 Laccaria amethystina K443DRAFT_671242 I
LACBIDRAFT_399488 Laccaria bicolor LACBIDRAFT_399488 I
M378DRAFT_10526 Amanita muscaria M378DRAFT_10526 I
M404DRAFT_15475 Pisolithus tinctorius M404DRAFT_15475 N
M413DRAFT_24478 Hebeloma cylindrosporum M413DRAFT_24478 I
MBM_08140 Marssonina brunnea MBM_08140 I
MPH_10014 Macrophomina phaseolina MPH_10014 I
MYCTH_2306512 Myceliophthora thermophila MYCTH_2306512 I
NechaG59099 Fusarium solani NechaG59099 I
NFIA_082550 Neosartorya fischeri CADNFIAG00007743 I
OIDMADRAFT_163726 Oidiodendron maius OIDMADRAFT_163726 I
PaG_02922 Pseudozyma aphidis PaG_02922 I
PAXRUDRAFT_830673 Paxillus rubicundulus PAXRUDRAFT_830673 I
Pc22g08580 Penicillium chrysogenum Pc22g08580 I
PCH_Pc22g08580 Penicillium rubens PCH_Pc22g08580 I
PDE_03610 Penicillium oxalicum PDE_03610 I
PDIP_87220 Penicillium digitatum PDIP_87220 I
PEX1_005530 Penicillium expansum PEX1_005530 I
PFL1_03021 Pseudozyma flocculosa PFL1_03021 I
PGTG_09159 Puccinia graminis PGTG_09159 D
PHACADRAFT_258404 Phanerochaete carnosa PHACADRAFT_258404 I
PHLGIDRAFT_76307 Phlebiopsis gigantea PHLGIDRAFT_76307 I
PHSY_000207 Pseudozyma hubeiensis PHSY_000207 I
PILCRDRAFT_94123 Piloderma croceum PILCRDRAFT_94123 I
PISMIDRAFT_7910 Pisolithus microcarpus PISMIDRAFT_7910 N
PITC_045920 Penicillium italicum PITC_045920 I
POSPLDRAFT_113058 Postia placenta POSPLDRAFT_113058 I
PSEUBRA_SCAF2g02944 Pseudozyma brasiliensis PSEUBRA_SCAF2g02944 I
PTRG_06536 Pyrenophora triticirepentis PTRG_06536 I
PTTG_02951 Puccinia triticina PTTG_02951 I
PTT_13315 Pyrenophora teres PTT_13315 I
PV04_09754 Capronia semiimmersa PV04_09754 I
PV10_04238 Exophiala mesophila PV10_04238 I
RO3G_08081 Rhizopus oryzae RO3G_08081 I
SBOR_4007 Sclerotinia borealis SBOR_4007 I
SCHCODRAFT_257622 Schizophyllum commune SCHCODRAFT_257622 I
SCLCIDRAFT_1208446 Scleroderma citrinum SCLCIDRAFT_1208446 N
SERLA73DRAFT_72478 Serpula lacrymans SERLA73DRAFT_72478 I
SETTUDRAFT_38779 Setosphaeria turcica SETTUDRAFT_38779 I
SNOG_12336 Phaeosphaeria nodorum SNOG_12336 I
SPPG_09179 Spizellomyces punctatus SPPG_09179 I
sr10662 Sporisorium reilianum sr10662 I
SS1G_02293 Sclerotinia sclerotiorum SS1G_02293 I
THITE_2109877 Thielavia terrestris THITE_2109877 I
U727_00433592471 Penicillium solitum U727_00433592471 I
UCRNP2_700 Neofusicoccum parvum UCRNP2_700 I
UM01925 Ustilago maydis UM01925 I
V499_09136 Pseudogymnoascus pannorum V499_09136 I
V565_004710 Rhizoctonia solani V565_004710 I
VHEMI06855 Torrubiella hemipterigena VHEMI06855 I
W97_07322 Coniosporium apollinis W97_07322 I
WALSEDRAFT_61007 Wallemia sebi WALSEDRAFT_61007 N