Eucgr.K02535 (Eucalyptus grandis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Eucgr.K02535 T344806_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.899 0.446
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.894 0.446
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.861 0.385
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.832 0.377
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.830 0.385
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.830 0.385
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K02535.1 TCP 53 228

Links

Other TCP family TFs
Other Eucalyptus grandis TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_01545 Beauveria bassiana BBA_01545 N
Bcin02g08280 Botrytis cinerea Bcin02g08280 N
BGHDH14_bgh04116 Blumeria graminis BGHDH14_bgh04116 N
CCM_00998 Cordyceps militaris CCM_00998 N
CH063_07308 Colletotrichum higginsianum CH063_07308 N
Cob_01816 Colletotrichum orbiculare Cob_01816 N
CPUR_00596 Claviceps purpurea CPUR_00596 N
CSUB01_04200 Colletotrichum sublineola CSUB01_04200 N
estExt_Genewise1.C_sca_3_chr4_2_00632 Nectria haematococca estExt_Genewise1.C_sca_3_chr4_2_00632 N
FFUJ_13265 Fusarium fujikuroi FFUJ_13265 N
FGRRES_06071 Fusarium graminearum FGRRES_06071 N
FOXG_07781 Fusarium oxysporum FOXG_07781 N
FPSE_04226 Fusarium pseudograminearum FPSE_04226 N
FVEG_04708 Fusarium verticillioides FVEG_04708 N
GLRG_10810 Colletotrichum graminicola GLRG_10810 N
MAC_09480 Metarhizium acridum MAC_09480 N
MAJ_05808 Metarhizium majus MAJ_05808 N
MAM_04763 Metarhizium album MAM_04763 N
MANI_012588 Metarhizium anisopliae MANI_012588 N
MBR_03064 Metarhizium brunneum MBR_03064 N
MGU_04765 Metarhizium guizhouense MGU_04765 N
MPH_12253 Macrophomina phaseolina MPH_12253 N
MYCTH_2305929 Myceliophthora thermophila MYCTH_2305929 N
NechaG60026 Fusarium solani NechaG60026 N
OCS_06782 Ophiocordyceps sinensis OCS_06782 N
S40285_02142 Stachybotrys chlorohalonata S40285_02142 N
SBOR_2825 Sclerotinia borealis SBOR_2825 N
THITE_2067650 Thielavia terrestris THITE_2067650 N
TRIATDRAFT_161664 Trichoderma atroviride TRIATDRAFT_161664 N
TRIREDRAFT_77609 Trichoderma reesei TRIREDRAFT_77609 N
TRIVIDRAFT_36951 Trichoderma virens TRIVIDRAFT_36951 N
UCRPA7_6046 Togninia minima UCRPA7_6046 N
UV8b_5421 Ustilaginoidea virens UV8b_5421 N
VDAG_09953 Verticillium dahliae VDAG_09953 N
VDBG_03434 Verticillium alfalfae VDBG_03434 N
VDBG_03434 Verticillium albo atrum VDBG_03434 N
X797_001129 Metarhizium robertsii X797_001129 N