Eucgr.K02535 (Eucalyptus grandis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Eucgr.K02535 T344806_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.899 0.446
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.894 0.446
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.861 0.385
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.832 0.377
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.830 0.385
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.830 0.385
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K02535.1 TCP 53 228

Links

Other TCP family TFs
Other Eucalyptus grandis TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm024946 Prunus mume Pm024946 I 0.909
PRUPE_ppa014630mg Prunus persica PRUPE_ppa014630mg I 0.906
30138.m003959 Ricinus communis 30138.m003959 I 0.906
PGSC0003DMG400001362 Solanum tuberosum PGSC0003DMG400001362 I 0.901
POPTR_0015s06980 Populus trichocarpa POPTR_0015s06980 I 0.901
MDP0000120671 Malus domestica MDP0000120671 I 0.901
TCP5 Arabidopsis lyrata fgenesh2_kg.8__2066__AT5G60970.1 D 0.899
Lus10034679.g Linum usitatissimum Lus10034679.g I 0.899
Cla019340 Citrullus lanatus Cla019340 I 0.898
evm.TU.supercontig_94.62 Carica papaya evm.TU.supercontig_94.62 I 0.898
Solyc02g089020.1 Solanum lycopersicum Solyc02g089020.1 I 0.897
cassava46272.m1 Manihot esculenta cassava46272.m1 I 0.897
mgf006703m Mimulus guttatus mgf006703m I 0.897
MTR_3g026050 Medicago truncatula MTR_3g026050 I 0.896
LPERR05G18480 Leersia perrieri LPERR05G18480 I 0.895
TCP5 Arabidopsis thaliana AT5G60970 D 0.894
cassava32529.m1 Manihot esculenta cassava32529.m1 I 0.894
Bostr.26833s0140 Boechera stricta Bostr.26833s0140 I 0.894
Cagra.0083s0006 Capsella grandiflora Cagra.0083s0006 I 0.894
Carubv10026656m.g Capsella rubella Carubv10026656m.g I 0.894
Thhalv10004440m.g Eutrema salsugineum Thhalv10004440m.g I 0.894
Bo7g098260 Brassica oleracea Bo7g098260 I 0.892
Bra012990 Brassica rapa Bra012990 I 0.892
Gorai.001G076700 Gossypium raimondii Gorai.001G076700 I 0.892
Bo2g161240 Brassica oleracea Bo2g161240 I 0.891
Bra029344 Brassica rapa Bra029344 I 0.891
gene26101-v1.0-hybrid Fragaria vesca gene26101-v1.0-hybrid I 0.891
PDK_20s1781021g001 Phoenix dactylifera PDK_20s1781021g001 I 0.891
GLYMA04G32324 Glycine max GLYMA04G32324 I 0.890
SapurV1A.0323s0010 Salix purpurea SapurV1A.0323s0010 I 0.890
SapurV1A.0901s0090 Salix purpurea SapurV1A.0901s0090 I 0.890
mgf007729m Mimulus guttatus mgf007729m I 0.889
Gorai.012G048500 Gossypium raimondii Gorai.012G048500 I 0.889
PGSC0003DMG400004082 Solanum tuberosum PGSC0003DMG400004082 I 0.888
Ca_13216 Cicer arietinum Ca_13216 I 0.887
MDP0000155433 Malus domestica MDP0000155433 I 0.887
Thhalv10014467m.g Eutrema salsugineum Thhalv10014467m.g I 0.887
Solyc06g069460.1 Solanum lycopersicum Solyc06g069460.1 I 0.886
Ciclev10020626m.g Citrus clementina Ciclev10020626m.g I 0.886
orange1.1g017725m.g Citrus sinensis orange1.1g017725m.g I 0.886
PK17676.1 Cannabis sativa PK17676.1 I 0.886
POPTR_0017s13050 Populus trichocarpa POPTR_0017s13050 I 0.885
TCM_014288 Theobroma cacao TCM_014288 I 0.885
BGIOSGA020173 Oryza indica BGIOSGA020173 I 0.884
OGLUM05G23780 Oryza glumaepatula OGLUM05G23780 I 0.884
ONIVA05G23460 Oryza nivara ONIVA05G23460 I 0.884
ORGLA05G0197200 Oryza glaberrima ORGLA05G0197200 I 0.884
ORUFI05G23910 Oryza rufipogon ORUFI05G23910 I 0.884
OS05G0513100 Oryza sativa OS05G0513100 I 0.884
Ca_24196 Cicer arietinum Ca_24196 I 0.884
Pavir.Ca01337 Panicum virgatum Pavir.Ca01337 I 0.884
Pavir.J35609 Panicum virgatum Pavir.J35609 I 0.884
Cucsa.198300 Cucumis sativus Cucsa.198300 I 0.883
PTF1 Vitis vinifera VIT_14s0068g00330 I 0.882
GRMZM2G035944 Zea mays GRMZM2G035944 I 0.881
Sb09g025340 Sorghum bicolor Sb09g025340 I 0.881
Si022833m.g Setaria italica Si022833m.g I 0.881
Traes_1AL_79B8C6F15 Triticum aestivum Traes_1AL_79B8C6F15 I 0.881
Eucgr.B00608 Eucalyptus grandis Eucgr.B00608 I 0.881
Bo3g004670 Brassica oleracea Bo3g004670 I 0.879
Bra005967 Brassica rapa Bra005967 I 0.878
chr4.CM0500.330.nd Lotus japonicus chr4.CM0500.330.nd I 0.878
GRMZM2G166946 Zea mays GRMZM2G166946 I 0.877
TCM_018809 Theobroma cacao TCM_018809 I 0.877
SapurV1A.0546s0080 Salix purpurea SapurV1A.0546s0080 I 0.877
SapurV1A.2245s0020 Salix purpurea SapurV1A.2245s0020 I 0.877
BGIOSGA000770 Oryza indica BGIOSGA000770 I 0.876
GLYMA06G22240 Glycine max GLYMA06G22240 I 0.876
GRMZM2G120151 Zea mays GRMZM2G120151 I 0.876
OBART01G31910 Oryza barthii OBART01G31910 I 0.876
OMERI01G28950 Oryza meridionalis OMERI01G28950 I 0.876
ONIVA01G36230 Oryza nivara ONIVA01G36230 I 0.876
ORGLA01G0259400 Oryza glaberrima ORGLA01G0259400 I 0.876
ORUFI01G35100 Oryza rufipogon ORUFI01G35100 I 0.876
OS01G0763200 Oryza sativa OS01G0763200 I 0.876
POPTR_0004s11510 Populus trichocarpa POPTR_0004s11510 I 0.876
Cucsa.215290 Cucumis sativus Cucsa.215290 I 0.876
gene04255-v1.0-hybrid Fragaria vesca gene04255-v1.0-hybrid I 0.876
Pavir.J15913 Panicum virgatum Pavir.J15913 I 0.876
GLYMA08G27155 Glycine max GLYMA08G27155 I 0.875
GLYMA05G00300 Glycine max GLYMA05G00300 I 0.874
OGLUM01G36040 Oryza glumaepatula OGLUM01G36040 I 0.874
Sb03g035350 Sorghum bicolor Sb03g035350 I 0.874
TRAES3BF002700090CFD_g Triticum aestivum TRAES3BF002700090CFD_g I 0.874
Pavir.Ea02793 Panicum virgatum Pavir.Ea02793 I 0.874
evm.TU.supercontig_14.188 Carica papaya evm.TU.supercontig_14.188 I 0.873
MDP0000692406 Malus domestica MDP0000692406 I 0.873
MTR_4g109660 Medicago truncatula MTR_4g109660 I 0.872
Gorai.006G009800 Gossypium raimondii Gorai.006G009800 I 0.872
SapurV1A.0795s0080 Salix purpurea SapurV1A.0795s0080 I 0.872
SapurV1A.4442s0010 Salix purpurea SapurV1A.4442s0010 I 0.872
SapurV1A.4443s0010 Salix purpurea SapurV1A.4443s0010 I 0.872
cassava29094.valid.m1 Manihot esculenta cassava29094.valid.m1 I 0.871
Ciclev10011887m.g Citrus clementina Ciclev10011887m.g I 0.870
orange1.1g015799m.g Citrus sinensis orange1.1g015799m.g I 0.870
cassava30483.valid.m1 Manihot esculenta cassava30483.valid.m1 I 0.869
PGSC0003DMG400024632 Solanum tuberosum PGSC0003DMG400024632 I 0.868
GLYMA18G50371 Glycine max GLYMA18G50371 I 0.867
BRADI2G50687 Brachypodium distachyon BRADI2G50687 I 0.865
Solyc02g065800.1 Solanum lycopersicum Solyc02g065800.1 I 0.865
Bostr.13129s0160 Boechera stricta Bostr.13129s0160 I 0.864
PDK_20s1781021g002 Phoenix dactylifera PDK_20s1781021g002 I 0.864
BRADI2G20060 Brachypodium distachyon BRADI2G20060 I 0.863
Ca_24948 Cicer arietinum Ca_24948 I 0.863
Eucgr.I02038 Eucalyptus grandis Eucgr.I02038 I 0.862
Gorai.008G199700 Gossypium raimondii Gorai.008G199700 I 0.862
PGSC0003DMG400026568 Solanum tuberosum PGSC0003DMG400026568 I 0.861
PK10344.1 Cannabis sativa PK10344.1 D 0.861
MLOC_14785 Hordeum vulgare MLOC_14785 I 0.859
OPUNC01G30950 Oryza punctata OPUNC01G30950 I 0.858
LjSGA_022391.1 Lotus japonicus LjSGA_022391.1 I 0.858
Carubv10001730m.g Capsella rubella Carubv10001730m.g I 0.857
MLOC_70266 Hordeum vulgare MLOC_70266 I 0.855
OMERI05G20240 Oryza meridionalis OMERI05G20240 I 0.854
GSMUA_Achr6G27420_001 Musa acuminata GSMUA_Achr6G27420_001 I 0.853
MDP0000320363 Malus domestica MDP0000320363 I 0.853
F775_18470 Aegilops tauschii F775_18470 I 0.851
mgf008626m Mimulus guttatus mgf008626m I 0.851
GSMUA_Achr4G32850_001 Musa acuminata GSMUA_Achr4G32850_001 I 0.850
Cla018836 Citrullus lanatus Cla018836 I 0.850
Aquca_002_00878 Aquilegia coerulea Aquca_002_00878 I 0.849
Cagra.1365s0013 Capsella grandiflora Cagra.1365s0013 I 0.849
29905.m000443 Ricinus communis 29905.m000443 I 0.848
LPERR01G27380 Leersia perrieri LPERR01G27380 I 0.847
Solyc03g115010.1 Solanum lycopersicum Solyc03g115010.1 I 0.847
Cla010936 Citrullus lanatus Cla010936 I 0.847
OPUNC05G20130 Oryza punctata OPUNC05G20130 I 0.846
Si002496m.g Setaria italica Si002496m.g I 0.846
TCP17 Arabidopsis lyrata fgenesh2_kg.6__773__AT5G08070.1 I 0.845
Cucsa.113300 Cucumis sativus Cucsa.113300 I 0.845
AMTR_s00154p00072430 Amborella trichopoda AMTR_s00154p00072430 I 0.844
GSMUA_Achr4G31520_001 Musa acuminata GSMUA_Achr4G31520_001 I 0.843
PRUPE_ppa007243mg Prunus persica PRUPE_ppa007243mg I 0.842
Pm016049 Prunus mume Pm016049 I 0.842
Bra039158 Brassica rapa Bra039158 I 0.837
Bo5g152840 Brassica oleracea Bo5g152840 I 0.836
GLYMA19G03786 Glycine max GLYMA19G03786 I 0.835
GLYMA17G08761 Glycine max GLYMA17G08761 I 0.832
Traes_5DS_643EDFE5B Triticum aestivum Traes_5DS_643EDFE5B I 0.832
Bostr.1460s0130 Boechera stricta Bostr.1460s0130 I 0.832
Cagra.3823s0015 Capsella grandiflora Cagra.3823s0015 I 0.832
LjT20A21.20.nc Lotus japonicus LjT20A21.20.nc D 0.832
Traes_5BS_77558D2A3 Triticum aestivum Traes_5BS_77558D2A3 I 0.831
TCP17 Arabidopsis thaliana AT5G08070 D 0.830
GSMUA_Achr4G22960_001 Musa acuminata GSMUA_Achr4G22960_001 I 0.830
MLOC_72581 Hordeum vulgare MLOC_72581 I 0.830
GSMUA_Achr2G12990_001 Musa acuminata GSMUA_Achr2G12990_001 I 0.829
GRMZM2G180568 Zea mays GRMZM2G180568 I 0.828
BRADI4G01547 Brachypodium distachyon BRADI4G01547 I 0.827
GSMUA_Achr5G02530_001 Musa acuminata GSMUA_Achr5G02530_001 I 0.827
MTR_6g015350 Medicago truncatula MTR_6g015350 I 0.827
GSMUA_Achr7G01160_001 Musa acuminata GSMUA_Achr7G01160_001 I 0.824
Pavir.Ca02949 Panicum virgatum Pavir.Ca02949 I 0.824
Si022811m.g Setaria italica Si022811m.g I 0.823