MDP0000693146 (Malus domestica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 MDP0000693146 T344961_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.894 0.562
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.892 0.650
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.889 0.650
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.888 0.625
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.888 0.625
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.888 0.625
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.874 0.525
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.874 0.525
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.854 0.600
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.852 0.512
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.835 0.525
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.835 0.525
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000693146 TCP 160 239

Links

Other TCP family TFs
Other Malus domestica TFs

317 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_01545 Beauveria bassiana BBA_01545 N 0.000
BGHDH14_bgh04116 Blumeria graminis BGHDH14_bgh04116 N 0.000
CCM_00998 Cordyceps militaris CCM_00998 N 0.000
CGGC5_3996 Colletotrichum gloeosporioides CGGC5_3996 N 0.000
CH063_07308 Colletotrichum higginsianum CH063_07308 N 0.000
Cob_01816 Colletotrichum orbiculare Cob_01816 N 0.000
CSUB01_04200 Colletotrichum sublineola CSUB01_04200 N 0.000
E5Q_06436 Mixia osmundae E5Q_06436 N 0.000
estExt_Genewise1.C_90051 Neurospora discreta estExt_Genewise1.C_90051 N 0.000
estExt_Genewise1.C_sca_3_chr4_2_00632 Nectria haematococca estExt_Genewise1.C_sca_3_chr4_2_00632 N 0.000
FFUJ_13265 Fusarium fujikuroi FFUJ_13265 N 0.000
FGRRES_06071 Fusarium graminearum FGRRES_06071 N 0.000
FOXG_07781 Fusarium oxysporum FOXG_07781 N 0.000
FPSE_04226 Fusarium pseudograminearum FPSE_04226 N 0.000
FVEG_04708 Fusarium verticillioides FVEG_04708 N 0.000
GGTG_05575 Gaeumannomyces graminis GGTG_05575 N 0.000
GLRG_10810 Colletotrichum graminicola GLRG_10810 N 0.000
HCOI00669800 Haemonchus contortus HCOI00669800 N 0.000
HCOI01493400 Haemonchus contortus HCOI01493400 N 0.000
MAC_09480 Metarhizium acridum MAC_09480 N 0.000
MAJ_05808 Metarhizium majus MAJ_05808 N 0.000
MANI_012588 Metarhizium anisopliae MANI_012588 N 0.000
MAPG_04542 Magnaporthe poae MAPG_04542 N 0.000
MGU_04765 Metarhizium guizhouense MGU_04765 N 0.000
MYCTH_2305929 Myceliophthora thermophila MYCTH_2305929 N 0.000
NechaG60026 Fusarium solani NechaG60026 N 0.000
OCS_06782 Ophiocordyceps sinensis OCS_06782 N 0.000
PODANS_5_2190 Podospora anserina PODANS_5_2190 N 0.000
S40285_02142 Stachybotrys chlorohalonata S40285_02142 N 0.000
S40288_01911 Stachybotrys chartarum S40288_01911 N 0.000
SMAC_08547 Sordaria macrospora SMAC_08547 N 0.000
THITE_2067650 Thielavia terrestris THITE_2067650 N 0.000
TRIREDRAFT_77609 Trichoderma reesei TRIREDRAFT_77609 N 0.000
UCRPA7_6046 Togninia minima UCRPA7_6046 N 0.000
VDAG_09953 Verticillium dahliae VDAG_09953 N 0.000
VDBG_03434 Verticillium alfalfae VDBG_03434 N 0.000
X797_001129 Metarhizium robertsii X797_001129 N 0.000