CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0232s0150
(
Salix purpurea
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
SapurV1A.0232s0150
T345042_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LjT20A21.20.nc
M02519_2.00
Lotus japonicus
GGGACCAY
RTGGTCCC
PBM
Weirauch et al.(2014)
pTH9202
0.955
0.632
TCP2
M02503_2.00
Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN
PBM
Weirauch et al.(2014)
pTH8198
0.943
0.568
TCP2
M02508_2.00
Arabidopsis lyrata
GGSMCCAC
GTGGKSCC
PBM
Weirauch et al.(2014)
pTH9231
0.943
0.568
OS01G0213800
M11398_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF5_01
0.893
0.355
TCP4
M02501_2.00
Arabidopsis thaliana
GGGACCAC
GTGGTCCC
PBM
Weirauch et al.(2014)
pTH8084
0.888
0.297
TCP4
M02514_2.00
Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV
PBM
Weirauch et al.(2014)
pTH9313
0.888
0.297
PK10344.1
M01313_2.00
Cannabis sativa
GGGACCAC
GTGGTCCC
PBM
Lambert et al.(2019)
pTH11464
0.883
0.303
TCP3
M02500_2.00
Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN
PBM
Weirauch et al.(2014)
pTH8835
0.881
0.290
TCP3
M07274_2.00
Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH
Dap-seq
OMalley et al.(2016)
TCP3_colamp_a
0.881
0.290
TCP3
M07275_2.00
Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH
Dap-seq
OMalley et al.(2016)
TCP3_col
0.881
0.290
TCP5
M02505_2.00
Arabidopsis thaliana
GGGACCAY
RTGGTCCC
PBM
Weirauch et al.(2014)
pTH7523
0.880
0.329
TCP13
M07283_2.00
Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
PTF1_col_a
0.877
0.316
TCP13
M07284_2.00
Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN
Dap-seq
OMalley et al.(2016)
PTF1_colamp_a
0.877
0.316
TCP5
M02510_2.00
Arabidopsis lyrata
GGGACCAC
GTGGTCCC
PBM
Weirauch et al.(2014)
pTH9233
0.875
0.297
TCP17
M07290_2.00
Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
TCP17_col_a
0.850
0.297
TCP17
M07291_2.00
Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY
Dap-seq
OMalley et al.(2016)
TCP17_colamp_a
0.850
0.297
For this family, TFs with SR scores >
0.822
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0232s0150.1.p
TCP
89
243
SGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKASQDAINELPSLNHCFPDTPKQLSDEKKSSDGTEQGFDSADVELEDTNFRQNQNLSLSKSACSSTSETSKGSGLSLSRSDIRYSREKARERARERTAKEKEKE
SapurV1A.0232s0150.2.p
TCP
89
243
SGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKASQDAINELPSLNHCFPDTPKQLSDEKKSSDGTEQGFDSADVELEDTNFRQNQNLSLSKSACSSTSETSKGSGLSLSRSDIRYSREKARERARERTAKEKEKE
SapurV1A.0232s0150.3.p
TCP
89
243
SGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKASQDAINELPSLNHCFPDTPKQLSDEKKSSDGTEQGFDSADVELEDTNFRQNQNLSLSKSACSSTSETSKGSGLSLSRSDIRYSREKARERARERTAKEKEKE
SapurV1A.0232s0150.4.p
TCP
89
243
SGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKASQDAINELPSLNHCFPDTPKQLSDEKKSSDGTEQGFDSADVELEDTNFRQNQNLSLSKSACSSTSETSKGSGLSLSRSDIRYSREKARERARERTAKEKEKE
Links
Other
TCP
family TFs
Other
Salix purpurea
TFs
445 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL000236
Aedes aegypti
AAEL000236
I
AALB006646
Anopheles albimanus
AALB006646
I
AARA001108
Anopheles arabiensis
AARA001108
I
AATE003062
Anopheles atroparvus
AATE003062
I
ACAC_0000772401
Angiostrongylus cantonensis
ACAC_0000772401
I
ACEP16720
Atta cephalotes
ACEP16720
I
ACHR005020
Anopheles christyi
ACHR005020
I
ACOC_0000013301
Angiostrongylus costaricensis
ACOC_0000013301
I
ACUA020854
Anopheles culicifacies
ACUA020854
I
ACYPI002885
Acyrthosiphon pisum
ACYPI002885
I
AEPI005796
Anopheles epiroticus
AEPI005796
I
AFAF018179
Anopheles farauti
AFAF018179
I
AFUN011568
Anopheles funestus
AFUN011568
I
AGAP000069
Anopheles gambiae
AGAP000069
I
Alligator_sinensis_CCG003246.1
Alligator sinensis
Alligator_sinensis_CCG003246.1
N
AMAM011474
Anopheles maculatus
AMAM011474
I
AMEC012184
Anopheles melas
AMEC012184
I
AMEM007373
Anopheles merus
AMEM007373
I
AMIN002134
Anopheles minimus
AMIN002134
I
ANCCAN_30535
Ancylostoma caninum
ANCCAN_30535
I
ANCCEY_07256
Ancylostoma ceylanicum
ANCCEY_07256
I
AQUA008315
Anopheles quadriannulatus
AQUA008315
I
ASIS005525
Anopheles sinensis
ASIS005525
I
ASTEI06209
Anopheles stephensi
ASTEI06209
I
ASU_00906
Ascaris suum
ASU_00906
I
BGIBMGA001488
Bombyx mori
BGIBMGA001488
I
BGLB003447
Biomphalaria glabrata
BGLB003447
I
BTMF_0001614201
Brugia timori
BTMF_0001614201
I
BXY_1193200
Bursaphelenchus xylophilus
BXY_1193200
I
CapteG111555
Capitella teleta
CapteG111555
I
CapteG40198
Capitella teleta
CapteG40198
N
CapteG82802
Capitella teleta
CapteG82802
I
CBG12232
Caenorhabditis briggsae
CBG12232
I
CBN31271
Caenorhabditis brenneri
CBN31271
I
Cflo_07366--XP_001121752.1_APIME
Camponotus floridanus
Cflo_07366--XP_001121752.1_APIME
I
CGI_10003726
Crassostrea gigas
CGI_10003726
I
CGOC_0000329701
Cylicostephanus goldi
CGOC_0000329701
I
CJA06474
Caenorhabditis japonica
CJA06474
N
CLEC001579
Cimex lectularius
CLEC001579
I
Cmyd_10015602
Chelonia mydas
Cmyd_10015602
N
CPIJ009525
Culex quinquefasciatus
CPIJ009525
I
CpipJ_CPIJ009525
Culex pipiens
CpipJ_CPIJ009525
I
CRE23967
Caenorhabditis remanei
CRE23967
I
C_00890
Schistosoma haematobium
C_00890
N
D915_07563
Fasciola hepatica
D915_07563
I
D917_06283
Trichinella nativa
D917_06283
I
D918_04073
Trichuris suis
D918_04073
I
DAPPUDRAFT_50302
Daphnia pulex
DAPPUDRAFT_50302
I
DICVIV_08747
Dictyocaulus viviparus
DICVIV_08747
I
DME_0000296101
Dracunculus medinensis
DME_0000296101
I
ECANG7_08418
Echinococcus canadensis
ECANG7_08418
I
EEL_0000313101
Elaeophora elaphi
EEL_0000313101
I
ENSLACG00000010819
Latimeria chalumnae
ENSLACG00000010819
N
ENSPFOG00000001440
Poecilia formosa
ENSPFOG00000001440
N
ENSXMAG00000012768
Xiphophorus maculatus
ENSXMAG00000012768
N
e_gw.6.414.1
Branchiostoma floridae
e_gw.6.414.1
I
fd102C
Drosophila melanogaster
FBgn0039937
D
fkh-10
Caenorhabditis elegans
WBGene00001442
I
foxq2
Danio rerio
ENSDARG00000071394
N
foxq2
Oryzias latipes
ENSORLG00000004973
N
GA10799
Drosophila pseudoobscura
FBgn0070855
I
GB50374
Apis mellifera
GB50374
I
GE14501
Drosophila yakuba
FBgn0232105
I
GF10343
Drosophila ananassae
FBgn0087384
I
GG16435
Drosophila erecta
FBgn0108666
I
GH24005
Drosophila grimshawi
FBgn0131461
I
GI14084
Drosophila mojavensis
FBgn0136838
I
GJ15974
Drosophila virilis
FBgn0203160
I
GK13662
Drosophila willistoni
FBgn0215670
I
GL15611
Drosophila persimilis
FBgn0153215
I
GM26767
Drosophila sechellia
FBgn0181620
I
GPUH_0002128801
Gongylonema pulchrum
GPUH_0002128801
I
HCOI02176800
Haemonchus contortus
HCOI02176800
I
HDID_0000955901
Hymenolepis diminuta
HDID_0000955901
I
HelroG146879
Helobdella robusta
HelroG146879
I
HelroG84905
Helobdella robusta
HelroG84905
I
HMEL012130
Heliconius melpomene
HMEL012130
I
HmN_000125600
Hymenolepis microstoma
HmN_000125600
I
HNAJ_0000218001
Hymenolepis nana
HNAJ_0000218001
I
HPBE_0001940301
Heligmosomoides bakeri
HPBE_0001940301
I
HPLM_0001940801
Haemonchus placei
HPLM_0001940801
I
Hsal_00505--XP_001121752.1_APIME
Harpegnathos saltator
Hsal_00505--XP_001121752.1_APIME
I
ISCW003951
Ixodes scapularis
ISCW003951
I
KGM_06490
Danaus plexippus
KGM_06490
I
L596_g8980
Steinernema carpocapsae
L596_g8980
I
L889_g23699
Steinernema feltiae
L889_g23699
I
L892_g5229
Steinernema scapterisci
L892_g5229
I
L893_g32272
Steinernema glaseri
L893_g32272
I
L898_g16488
Steinernema monticolum
L898_g16488
I
LCUP005975
Lucilia cuprina
LCUP005975
I
LDEC001528
Leptinotarsa decemlineata
LDEC001528
I
LLOJ007413
Lutzomyia longipalpis
LLOJ007413
I
LotgiG79781
Lottia gigantea
LotgiG79781
I
MESCA005623
Megaselia scalaris
MESCA005623
I
NBR_0000095001
Nippostrongylus brasiliensis
NBR_0000095001
I
nDi.2.2.2.g05283
Dirofilaria immitis
nDi.2.2.2.g05283
I
NECAME_04384
Necator americanus
NECAME_04384
I
NEMVEDRAFT_v1g125256
Nematostella vectensis
NEMVEDRAFT_v1g125256
I
NEMVEDRAFT_v1g39596
Nematostella vectensis
NEMVEDRAFT_v1g39596
I
NEMVEDRAFT_v1g59063
Nematostella vectensis
NEMVEDRAFT_v1g59063
I
nOo.2.0.1.g07936
Onchocerca ochengi
nOo.2.0.1.g07936
I
NV18839
Nasonia vitripennis
NV18839
I
Ocbimv22038677m.g
Octopus bimaculoides
Ocbimv22038677m.g
I
OESDEN_02306
Oesophagostomum dentatum
OESDEN_02306
I
Ogr12164
Ophisaurus gracilis
Ogr12164
N
PHUM244390
Pediculus humanus
PHUM244390
I
PPAI000826
Phlebotomus papatasi
PPAI000826
I
Pvit_09831
Pogona vitticeps
Pvit_09831
N
RPRC002475
Rhodnius prolixus
RPRC002475
I
Sakowv30023329m.g
Saccoglossus kowalevskii
Sakowv30023329m.g
I
SBAD_0000682701
Soboliphyme baturini
SBAD_0000682701
I
SINV17382
Solenopsis invicta
SINV17382
I
SMAR012448
Strigamia maritima
SMAR012448
I
SMRZ_0001178901
Schistosoma margrebowiei
SMRZ_0001178901
N
SMU15004452
Schmidtea mediterranea
SMU15004452
I
SVUK_0000095001
Strongylus vulgaris
SVUK_0000095001
I
TC004761
Tribolium castaneum
TC004761
I
TCLT_0000158601
Thelazia callipaeda
TCLT_0000158601
I
TCNE_0000717001
Toxocara canis
TCNE_0000717001
I
tetur01g09690
Tetranychus urticae
tetur01g09690
I
TMUE_s0045003300
Trichuris muris
TMUE_s0045003300
I
TTAC_0000212301
Hydatigera taeniaeformis
TTAC_0000212301
I
TTRE_0000002201
Trichuris trichiura
TTRE_0000002201
I
WBGene00238063
Onchocerca volvulus
WBGene00238063
I
WUBG_10187
Wuchereria bancrofti
WUBG_10187
I
XP_002159677.1
Hydra magnipapillata
XP_002159677.1
I
YQE_09099
Dendroctonus ponderosae
YQE_09099
I