SapurV1A.4443s0010 (Salix purpurea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 SapurV1A.4443s0010 T345072_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.953 0.464
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.932 0.450
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.932 0.429
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.905 0.407
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.905 0.407
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.904 0.407
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.904 0.407
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.881 0.350
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.877 0.357
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.875 0.350
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.875 0.350
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.871 0.350
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.871 0.350
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.871 0.350
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.844 0.329
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.844 0.329
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.4443s0010.1.p TCP 48 221

Links

Other TCP family TFs
Other Salix purpurea TFs

419 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29889.m003269 Ricinus communis 29889.m003269 I
AMTR_s00057p00042800 Amborella trichopoda AMTR_s00057p00042800 I
Aquca_003_00568 Aquilegia coerulea Aquca_003_00568 I
AT3G16940 Arabidopsis thaliana AT3G16940 I
Bo5g123580 Brassica oleracea Bo5g123580 I
Bo8g043280 Brassica oleracea Bo8g043280 I
Bostr.19424s0974 Boechera stricta Bostr.19424s0974 I
Bostr.30275s0060 Boechera stricta Bostr.30275s0060 I
Bra022188 Brassica rapa Bra022188 I
Bra038040 Brassica rapa Bra038040 I
BRADI1G27170 Brachypodium distachyon BRADI1G27170 I
Cagra.0053s0009 Capsella grandiflora Cagra.0053s0009 I
Cagra.4396s0001 Capsella grandiflora Cagra.4396s0001 I
CAMTA5 Arabidopsis thaliana AT4G16150 D
Carubv10004090m.g Capsella rubella Carubv10004090m.g I
Carubv10012963m.g Capsella rubella Carubv10012963m.g I
cassava40488.m1 Manihot esculenta cassava40488.m1 I
Ca_02997 Cicer arietinum Ca_02997 I
chr4.CM0429.140.nd Lotus japonicus chr4.CM0429.140.nd I
Cla009415 Citrullus lanatus Cla009415 I
Cucsa.325250 Cucumis sativus Cucsa.325250 I
Eucgr.H04035 Eucalyptus grandis Eucgr.H04035 I
evm.TU.supercontig_929.1 Carica papaya evm.TU.supercontig_929.1 I
fgenesh1_pg.C_scaffold_7002321 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7002321 I
fgenesh1_pm.C_scaffold_3001474 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3001474 I
gene10891-v1.0-hybrid Fragaria vesca gene10891-v1.0-hybrid I
GLYMA07G37090 Glycine max GLYMA07G37090 I
GLYMA09G04310 Glycine max GLYMA09G04310 I
GLYMA15G15350 Glycine max GLYMA15G15350 I
GLYMA17G03510 Glycine max GLYMA17G03510 I
Gorai.004G075100 Gossypium raimondii Gorai.004G075100 I
Gorai.005G065700 Gossypium raimondii Gorai.005G065700 I
Gorai.006G079000 Gossypium raimondii Gorai.006G079000 I
Gorai.008G091800 Gossypium raimondii Gorai.008G091800 I
Gorai.011G198600 Gossypium raimondii Gorai.011G198600 I
Gorai.012G074000 Gossypium raimondii Gorai.012G074000 I
GRMZM2G032336 Zea mays GRMZM2G032336 I
GSMUA_Achr8G10490_001 Musa acuminata GSMUA_Achr8G10490_001 I
Lus10016873.g Linum usitatissimum Lus10016873.g I
Lus10036455.g Linum usitatissimum Lus10036455.g I
Lus10037738.g Linum usitatissimum Lus10037738.g I
Lus10041126.g Linum usitatissimum Lus10041126.g I
MDP0000164873 Malus domestica MDP0000164873 I
MDP0000167705 Malus domestica MDP0000167705 I
MDP0000233860 Malus domestica MDP0000233860 I
mgf012030m Mimulus guttatus mgf012030m I
mgf013655m Mimulus guttatus mgf013655m I
MTR_2g034650 Medicago truncatula MTR_2g034650 I
MTR_4g121840 Medicago truncatula MTR_4g121840 I
OB07G20740 Oryza brachyantha OB07G20740 I
OGLUM07G13800 Oryza glumaepatula OGLUM07G13800 I
OLONG_014480 Oryza longistaminata OLONG_014480 I
ONIVA07G13300 Oryza nivara ONIVA07G13300 I
OPUNC07G13630 Oryza punctata OPUNC07G13630 I
orange1.1g002476m.g Citrus sinensis orange1.1g002476m.g I
ORUFI07G15090 Oryza rufipogon ORUFI07G15090 I
OS07G0490200 Oryza sativa OS07G0490200 I
Pavir.Ba00948 Panicum virgatum Pavir.Ba00948 I
Pavir.J11066 Panicum virgatum Pavir.J11066 I
PK20811.1 Cannabis sativa PK20811.1 I
POPTR_0008s10730 Populus trichocarpa POPTR_0008s10730 I
POPTR_0010s15160 Populus trichocarpa POPTR_0010s15160 I
PRUPE_ppa001493mg Prunus persica PRUPE_ppa001493mg I
Q2WEL1_ORYSA Oryza sativa Q2WEL1_ORYSA D
SapurV1A.0050s0650 Salix purpurea SapurV1A.0050s0650 I
SapurV1A.0060s0130 Salix purpurea SapurV1A.0060s0130 I
Sb02g033620 Sorghum bicolor Sb02g033620 I
Si028862m.g Setaria italica Si028862m.g I
Solyc01g060170.2 Solanum lycopersicum Solyc01g060170.2 I
Solyc12g099340.1 Solanum lycopersicum Solyc12g099340.1 I
TCM_021327 Theobroma cacao TCM_021327 I
Thhalv10020047m.g Eutrema salsugineum Thhalv10020047m.g I
Thhalv10024342m.g Eutrema salsugineum Thhalv10024342m.g I
Traes_2AS_4C4190DEB Triticum aestivum Traes_2AS_4C4190DEB I
VIT_05s0077g01240 Vitis vinifera VIT_05s0077g01240 I