Thhalv10018773m.g (Eutrema salsugineum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Thhalv10018773m.g T345090_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.917 0.346
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.917 0.346
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.917 0.346
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.915 0.353
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10018773m TCP 106 179
Thhalv10018773m TCP 174 233

Links

Other TCP family TFs
Other Eutrema salsugineum TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOM031533 Anopheles coluzzii ACOM031533 I
DUXA Canis familiaris ENSCAFG00000002431 I
DUXA Tursiops truncatus ENSTTRG00000014200 I
DUXA Pan troglodytes ENSPTRG00000028871 I
DUXA Oryctolagus cuniculus ENSOCUG00000011331 I
DUXA Macaca mulatta ENSMMUG00000007788 I
DUXA Microcebus murinus ENSMICG00000006042 I
DUXA Loxodonta africana ENSLAFG00000030167 I
DUXA Homo sapiens ENSG00000258873 D
DUXA Felis catus ENSFCAG00000007545 I
DUXA Equus caballus ENSECAG00000021112 I
ENSAMEG00000004960 Ailuropoda melanoleuca ENSAMEG00000004960 I
ENSBTAP00000049813-D1 Bos grunniens ENSBTAP00000049813-D1 I
ENSCJAG00000021948 Callithrix jacchus ENSCJAG00000021948 I
ENSCJAG00000031259 Callithrix jacchus ENSCJAG00000031259 I
ENSCJAG00000032154 Callithrix jacchus ENSCJAG00000032154 I
ENSCSAG00000001657 Chlorocebus sabaeus ENSCSAG00000001657 I
ENSDNOG00000025505 Dasypus novemcinctus ENSDNOG00000025505 I
ENSDNOG00000046863 Dasypus novemcinctus ENSDNOG00000046863 I
ENSDNOG00000049160 Dasypus novemcinctus ENSDNOG00000049160 I
ENSMICG00000006881 Microcebus murinus ENSMICG00000006881 I
ENSMICG00000015060 Microcebus murinus ENSMICG00000015060 I
ENSMMUP00000010232 Macaca fascicularis ENSMMUP00000010232 I
ENSNLEG00000010886 Nomascus leucogenys ENSNLEG00000010886 I
ENSOARG00000003446 Ovis aries ENSOARG00000003446 I
ENSPANG00000009357 Papio anubis ENSPANG00000009357 I
ENSPPYG00000010457 Pongo abelii ENSPPYG00000010457 I
NEMVEDRAFT_v1g38792 Nematostella vectensis NEMVEDRAFT_v1g38792 I
NEMVEDRAFT_v1g92436 Nematostella vectensis NEMVEDRAFT_v1g92436 I
NEMVEDRAFT_v1g92500 Nematostella vectensis NEMVEDRAFT_v1g92500 I